EY702176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: YFML_BACSU (Putative ATP-dependent RNA helicase yfmL OS=Bacillus subtilis GN=yfmL PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 81/291 (27.84%), Postives = 155/291 (53.26%), Query Frame = 2 Query: 2 HASGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDVQ 874 +ASGF+KP+ +Q++ G DVI ++ +GTGKT + +L+++ QA++LAP+REL QI +V++ ++ + +GG +V++ L+ H++VGTPGRVF++++ + L+ +K VLDE D+++ ++ + I + Q+ FSAT+ E ++ R+ +P + V+R + +K Y+ + + K++ L L L Q+++FV + ++ + H + + R I+ F G F L+ TD+ ARG+D++ Sbjct: 20 NASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQEPEVLKVQRSKAEAGKVKHQYLICDQRD-KVKLLQKL-SRLEGMQALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIIATFEDGEFPLLLATDIAARGLDIE 308
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RRP3_AJECN (ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RRP3 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 95/293 (32.42%), Postives = 150/293 (51.19%), Query Frame = 2 Query: 5 ASGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ---SLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL-TLEGIKQFYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDV 871 A G++ P+ IQ I +G D+I A++G+GKTA F ILQ L L+LAPTRELA QI + ALG + V+ VGG + L H++V TPGR+ D L SLR +K V+DEAD +L F + I ++LP + + +FSATM + + R ++ P+R+ + ++ T+ + Q Y+ + ++K L L A +++F T + L +R+ HG + Q++R + +FRS S L+ TD+ ARG+D+ Sbjct: 76 ALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKPQSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRS--LKYLVMDEADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYLFI-PHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLHGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDI 365
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RHLB_VIBCM (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rhlB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 94/300 (31.33%), Postives = 151/300 (50.33%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP-AKVQVG-VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDVQQ 877 GF + IQ + G D+ QAQ+GTGKT F + L Q +A+++APTRELA QI L G+K GG S + LQ+GV +++GT GR+ D +++ ++I+ VLDEAD M GF I +F+ +P K ++ +FSAT+ E+ + MN P ++V+ ++ T I++ FY + E K+ L L E +++IF NT + + + + + +H V GD+ Q R+ I+ +F G L+ TD+ ARG+ + Q Sbjct: 28 GFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPS---NEHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQ 324
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RHLB_VIBCH (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae GN=rhlB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 94/300 (31.33%), Postives = 151/300 (50.33%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP-AKVQVG-VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDVQQ 877 GF + IQ + G D+ QAQ+GTGKT F + L Q +A+++APTRELA QI L G+K GG S + LQ+GV +++GT GR+ D +++ ++I+ VLDEAD M GF I +F+ +P K ++ +FSAT+ E+ + MN P ++V+ ++ T I++ FY + E K+ L L E +++IF NT + + + + + +H V GD+ Q R+ I+ +F G L+ TD+ ARG+ + Q Sbjct: 28 GFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPS---NEHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQ 324
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RHLB_VIBC3 (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rhlB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 94/300 (31.33%), Postives = 151/300 (50.33%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP-AKVQVG-VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDVQQ 877 GF + IQ + G D+ QAQ+GTGKT F + L Q +A+++APTRELA QI L G+K GG S + LQ+GV +++GT GR+ D +++ ++I+ VLDEAD M GF I +F+ +P K ++ +FSAT+ E+ + MN P ++V+ ++ T I++ FY + E K+ L L E +++IF NT + + + + + +H V GD+ Q R+ I+ +F G L+ TD+ ARG+ + Q Sbjct: 28 GFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPS---NEHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQ 324
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: DDX42_XENLA (ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32 Identity = 90/297 (30.30%), Postives = 150/297 (50.51%), Query Frame = 2 Query: 8 SGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRI----LVKRDELTLEGIKQFYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDV 871 S + +P+ IQ +GI G D+I A++G+GKTA F IL + D +Q A+++ PTREL QQI + G ++ A GG S+ E + LQ G +VV TPGR+ D +++++ + V DEAD M GF+ Q+ I + Q +FSAT + ++ R + P+R+ + + +E + ++ E W L + T ++ ++FV + L +R DH + HGDMDQ+ R+ ++ +F+ S L+ TD+ ARG+D+ Sbjct: 268 SEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRLVEFTSTGSV---LVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSERNKVISDFKKKSIPVLVATDVAARGLDI 561
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 96/291 (32.99%), Postives = 146/291 (50.17%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ---SLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL-TLEGIKQFYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDV 871 G++ P+AIQ I +G D+I A++G+GKTA F ILQ L LVLAPTRELA QI + LG + V+ VGG + L H++V TPGR+ D L SLR +K V+DEAD +L F + I ++LP + + +FSATM + + R + P+R+ V + T+ ++Q Y+ + + L + L E + +IF T + L+ +R HG + Q+ R + +FRS S L+ TD+ ARG+D+ Sbjct: 71 GYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLR--NLKYLVMDEADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVG-QSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDI 358
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RRP3_ASPFU (ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 94/291 (32.30%), Postives = 149/291 (51.20%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ---SLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL-TLEGIKQFYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDV 871 G++ P+ IQ I +G D+I A++G+GKTA F ILQ L L+LAPTRELA QI K +LG + V+ VGG + L H++V TPGR+ D L SLR +K V+DEAD +L F + I ++LP + + +FSATM + + R ++ P+R+ V ++ T+ + Q Y+ + + + + L E + ++IF T + ++ +RS HG + Q+ R + +FRS S L+ TD+ ARG+D+ Sbjct: 71 GYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRT--LKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVG-QSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDI 358
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RHLB_PASMU (ATP-dependent RNA helicase rhlB OS=Pasteurella multocida GN=rhlB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 98/296 (33.11%), Postives = 150/296 (50.68%), Query Frame = 2 Query: 11 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT-----ATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQ--VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FYVNVEXEEWKLETLCDLYETLAITQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDV 871 GF+ + IQ + G DV QAQ+GTGKT ATF + QQ D G Q +AL+LAPTRELA QI L G+K GG + + ++ GV +++GT GRV D +++ +R D I++ VLDEAD M GF I + + PA +FSAT+ + E+ + MN P + ++ + T IK+ FY + + K+ L L E + +IF NT + + + + + H V GD+ Q R ++++F G L+ TD+ ARG+ + Sbjct: 28 GFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPS---NQDKMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHI 320
BLAST of EY702176 vs. ExPASy Swiss-Prot
Match: RH14_ORYSJ (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica GN=Os01g0172200 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31 Identity = 95/299 (31.77%), Postives = 150/299 (50.17%), Query Frame = 2 Query: 8 SGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG---ILQQLDYGLVQCQA-LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILV-KRDELTLEGIKQFYVNVEXEEWKLETLCDLYETLAI-TQSVIFVNTXRKVDWLTXQMRSRDHTVSATHGDMDQNTRDIIMREFRSGSFSCLITTDLLARGIDVQQFHL 886 +GF P+ IQ + + D++ A++G+GKT + +L++L + LVL+PTRELA QI+ + G + GG R L+ G +VV TPGR+ D+L + + + VLDEAD ML GF+ QI I + + K Q +F+AT P E +I ++ PV++ + D+L YV+V K L + + ++ +IF +T R D L + +R + SA HGD Q RD ++ EFRSG L+ TD+ ARG+D++ + Sbjct: 198 AGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRV 495 The following BLAST results are available for this feature:
BLAST of EY702176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702176 ID=EY702176; Name=EY702176; organism=Citrus sinensis; type=EST; length=899bpback to top |