CX077059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: CAIC_ECO45 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = -2 Query: 323 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 688 +++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 395 EADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = -2 Query: 323 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 688 +++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 395 EADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNL 516
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18 Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = -2 Query: 323 SEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 685 S+GW TGD+ ID DGF+ I DR K++IK G + ELE++ + HP I DAAV+ ++ + P+ V+ S L+ EV ++ A +VA ++ FV +P+N +GKIL+ L Sbjct: 409 SDGWFSTGDVATIDSDGFMTICDRAKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERPLLIAVKSPNSELTSGEVCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRL 529
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: MENE_BACA2 (2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens (strain FZB42) GN=menE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17 Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = -2 Query: 299 GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 679 GW +TGDL Y+DD+GF++++DR +LI G + PAE+EA LL HP +++A V D + G+ P A++V S +S E+ F ++A YK V +P+N S K++R L +L +L Sbjct: 362 GWFKTGDLGYLDDEGFLYVLDRRSDLIISGGENIYPAEVEAALLAHPAVAEAGVSGSEDPKWGKVPHAFLV--LTSSVSSEELTAFCRERLAKYKIPAAFFEVDGLPRNASNKLMRHRLNELRKGEL 486
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLU (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 323 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 688 +++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 395 EADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLC (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiC PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 323 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 688 +++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 395 EADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 45/120 (37.50%), Postives = 75/120 (62.50%), Query Frame = -2 Query: 323 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 682 +GWL TGD+ +D+DGF+ IVDR K++I G+ V P E+E ++ H K+ ++AV+ P++ +G+ +VV+ S L+ E++ R + YK + V F +PK+ GKILR++L Sbjct: 431 DGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKNDAS-LTPEELLTHCRRYLTGYKVPKIVEFRDELPKSNVGKILRREL 549
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 45/128 (35.16%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 682 +GWL TGD+ +D+DGF+ IVDR K++I G+ V P E+E +++ H + + A V P +G+ +VV++ L+++ ++ F R + YK ++V F +PK+ GKILR++L A K+ Sbjct: 431 DGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEARGKV 557
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 45/128 (35.16%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 299 EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 682 +GWL TGD+ +D+DGF+ IVDR K++I G+ V P E+E +++ H + + A V P +G+ +VV++ L+++ ++ F R + YK ++V F +PK+ GKILR++L A K+ Sbjct: 431 DGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEARGKV 557
BLAST of CX077059 vs. ExPASy Swiss-Prot
Match: CAIC_ESCF3 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiC PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 323 DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 688 +++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E +F + +A +K + +P+N SGKI+RK L Sbjct: 395 EADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGEILSEEEFFNFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKAL 516 The following BLAST results are available for this feature:
BLAST of CX077059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 337
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077059 ID=CX077059; Name=CX077059; organism=Citrus sinensis; type=EST; length=689bpback to top |