EY702108

Overview
NameEY702108
Unique NameEY702108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 74/204 (36.27%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGT 808
            IGV YG   DNLPP +   +L QS  I  LR+Y  D   + AL+ T +G+++   + D+ +LASDP+AA  W+ SNV      S    I VGNEV   +  +++                  LGG IKVST    S + Q  PPS G+F  Q  M    Q+L+  G+P   N YP+F+Y  +P    L + LF       +PGT
Sbjct:   30 IGVCYGVNGDNLPPASDVVQLYQSNGINLLRIYFPDANPLNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNV-QASRRSACRYIAVGNEVSGGDTGSIL----PAMQNLNAALANAGLGGSIKVSTA-VQSDVTQGFPPSQGTF-SQGYMAPSRQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALF------TSPGT 220          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 66/197 (33.50%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            +GV YG + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:    1 LGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 196          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.201e-23
Identity = 67/197 (34.01%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D    +  I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   35 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLF 230          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.872e-23
Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   35 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLF 230          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.872e-23
Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   36 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLF 231          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.393e-22
Identity = 56/195 (28.72%), Postives = 102/195 (52.31%), Query Frame = 2
Query:  200 GVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            GV YG++ +NLP P     L    +I+++R+YG  P +++AL  + + +++   + ++  LAS  + A +W+  N+  +    +   ++VGNEV    + +                    LG ++KVST      LA+S PPS GSF    R   + G+++FL ++ +P  +N Y +FAY ++P+  +L + LF
Sbjct:   35 GVCYGRLGNNLPTPQEVVALYNQANIRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEV--KPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALF 227          

HSP 2 Score: 22.3274 bits (46), Expect = 1.393e-22
Identity = 10/22 (45.45%), Postives = 12/22 (54.55%), Query Frame = 3
Query:  816 YMNMFDAQVDAGHQP*MAVGSG 881
            Y N+FDA VDA +      G G
Sbjct:  241 YRNLFDASVDAVYAALEKAGGG 262          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  200 GVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGD-IPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSD 742
            GV YG V DNLP  +   +L +S +I  +R+Y  D   + AL  +G+ +++     D +  L  DP+ A  W+ SNV  +YP   I  I VGNEV  + D  +I                 +L   IKVST     V+  S PPSSG F     +  I +FL   G+PF  N YP+FAY+ D
Sbjct:    6 GVCYGMVGDNLPSRSDVVQLYKSRNIHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPDVLIRYIAVGNEVP-AGDTGII---LLAMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVFRDPSGLVPIARFLDSTGAPFLANVYPYFAYRDD 183          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.938e-21
Identity = 67/196 (34.18%), Postives = 95/196 (48.47%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFI-RQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 781
            IGV  G + +NLP P+    L +S  I  +R+Y  +  ++ AL+ TG+ +++      +P+LAS P+AA  W+ +NV  F P      I V NEVM S  Q+ I                 + G  IKVST     V   + PPS+G    +   +R IL FL     P   N YP+FAY+ +PR   L F  F P
Sbjct:   26 IGVCNGVLGNNLPAPSDVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDVGPA-LPSLASSPSAAAAWVKANVSSF-PGVSFRYIAVRNEVMDSAGQSTI-----LPAMRNVQRALAAAGSPIKVSTSVRFDVFNNTSPPSNGVLADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVP 214          

HSP 2 Score: 20.4014 bits (41), Expect = 1.938e-21
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3
Query:  816 YMNMFDAQVDA 848
            Y N+FDA VD+
Sbjct:  226 YTNLFDAMVDS 236          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFH 778
            IGV YG  A+NLP  +    + +   I+ +RLY  + A ++A+  TG+ +V+GA +  +  LA+ P AA  W+ SN+   YP      + VGNEV     +NL+                    G IKV+T  + ++L    PPS+GSF  +    M  ++QFL    +P   N YP+ A+  +P    + + LF+
Sbjct:    7 IGVCYGMSANNLPAASTVVSMFKFNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNI-QAYPKVSFRYVCVGNEVAGGATRNLVPAMKNVHGALVAAGL-----GHIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWAYNPSAMDMGYALFN 196          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 61/195 (31.28%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + D LP P+    L +  +IQ++RLYG DP  + AL  + + +++   S D+  LAS    A +W+  NV  +    +   I VGNEV  S    L+                   G ++KVST  A      + PPS G F  +    +  ++ FL    SP  +N YP+F+Y  D     L + LF
Sbjct:   32 IGVCYGMLGDTLPSPSDVVALYKQQNIQRMRLYGPDPGALAALRGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKPSVGGFLLQ------AMQNIENAVSGAGLEVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALF 220          
The following BLAST results are available for this feature:
BLAST of EY702108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
E13B_MAIZE3.049e-2336.27Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E131_SOLTU3.049e-2333.50Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13B_NICPL5.201e-2334.01Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13F_TOBAC8.872e-2334.01Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC8.872e-2334.01Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13A_SOYBN1.393e-2228.72Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13E_HORVU4.403e-2235.71Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E13C_HORVU1.938e-2134.18Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
GUB2_HORVU2.854e-2131.12Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]
E13A_ARATH6.358e-2131.28Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702108 ID=EY702108; Name=EY702108; organism=Citrus sinensis; type=EST; length=930bp
ATGGACGCCTGCGGTACCGGTCCGGAATCCCTCCACAACCACGCGTCCGC
AAGCAACAATCACCACAACAAATTTCACTTTCTTCTCCATCTATTTCTCT
CTGTCCATGGCCAAGTCCAACCCCAACTCCTCACTCTTCCTCTTCGTCTC
TCTCCTCCTTTTTCAAGTTCTTCACTTCTCAAGTTCGCAGTCATTCATCG
GAGTGAACTACGGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACA
GCGAAGCTTCTGCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGC
AGATCCGGCCATCATCAAAGCACTAGCAAACACTGGGGTTGGTATTGTAA
TTGGCGCTTCCAGTGGAGATATTCCGGCTCTCGCTTCTGATCCTAACGCC
GCTACTCAGTGGATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAA
AATAATTCTCATCACCGTTGGGAATGAGGTGATGATATCAAATGACCAAA
ATCTAATCAGTCAGCTTCTTCCGGCAATGGCAAATATGCAAAACGCTCTT
AACGCGGCCTCACTTGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGAT
GTCCGTGTTGGCACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCC
AAGACACTATGAGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCT
TTTACCATCAACCCGTACCCGTTTTTCGCTTATCAAAGTGACCCGAGACC
CGAGACTCTTGCCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTC
CCGGAACGGGATCAATACATGAACATGTTCGACGCCCAGGTTGATGCTGG
ACATCAACCTTGAATGGCAGTGGGGTCAGGATGTCCAGATTGTGGGTGCA
AAAACAGGTGGCCTTACGCGGAAACCCGAT
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