EY702097

Overview
NameEY702097
Unique NameEY702097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.543e-16
Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 314
            SKTKP+S I   Y+AG   FGENYVQE VEK         +LEWHFIG LQSNK + +     +   ++++D  KIA RLN    T  + PL VL+Q+N S EE
Sbjct:   34 SKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEE 133          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 311
            SKTKPV  I +  +AG R FGENYVQE V+K     +      LEWHFIG LQSNK + +     +   V ++D EKIA RL+     +   PL+VL+QVNTSGE
Sbjct:   35 SKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGE 135          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR--KPLKVLVQVNTSGEE 314
            SKTK   +I   Y    R FGENYVQE+ EK+  L     D+ WHFIG +QSNK+   +   P L  VE+V+ EK A   ++     G    PL+VLVQVNTSGE+
Sbjct:   36 SKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGK-ICNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGED 140          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.723e-13
Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 314
            SKT P  VIR+ Y  G + +GEN VQE ++K   L D DLEWHFIG LQ+NKVK L+  V    ++ S+D + +A  + +           VL++VN  GEE
Sbjct:   34 SKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEE 131          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 311
            SKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E
Sbjct:   35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDE 134          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 311
            SKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E
Sbjct:   35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDE 134          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 311
            SKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E
Sbjct:   35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDE 134          
BLAST of EY702097 vs. ExPASy Swiss-Prot
Match: Y556_SYNY3 (UPF0001 protein slr0556 OS=Synechocystis sp. (strain PCC 6803) GN=slr0556 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 3
Query:   12 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLVQVNTSG 308
            +KTK ++ I   Y AG R F E+ +QE + K   L +  D+ WHFIG LQSNK + +   V N   + SVDN  IA +L+R+ E + + P     +K+L   N SG
Sbjct:   24 TKTKAIADIEAAYGAGIRDFAESRIQEALPKIEALANYQDINWHFIGRLQSNKARKV---VENFTYIHSVDNLAIAVKLDRIAEELNKFPQGLLQIKLLPDENKSG 126          
The following BLAST results are available for this feature:
BLAST of EY702097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
Y090_HAEIN1.543e-1648.08UPF0001 protein HI0090 OS=Haemophilus influenzae G... [more]
Y461_VIBCH4.489e-1648.57UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0... [more]
PROSC_CAEEL8.465e-1546.23Proline synthetase co-transcribed bacterial homolo... [more]
Y274_AQUAE2.723e-1343.14UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_2... [more]
YGGS_ECOLI1.351e-1244.23UPF0001 protein yggS OS=Escherichia coli (strain K... [more]
YGGS_ECOL61.351e-1244.23UPF0001 protein yggS OS=Escherichia coli O6 GN=ygg... [more]
YGGS_ECO571.351e-1244.23UPF0001 protein yggS OS=Escherichia coli O157:H7 G... [more]
Y556_SYNY34.348e-1139.62UPF0001 protein slr0556 OS=Synechocystis sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702097 ID=EY702097; Name=EY702097; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGAGCAAAACCAAACCGGTCTCAGTAATCCGTCAGGTTTAT
GAGGCCGGTCACCGATGTTTCGGTGAAAACTACGTTCAAGAAATAGTGGA
AAAGGCGGCTCAGCTTCCAGATGATCTAGAATGGCATTTCATTGGGAACC
TGCAGAGCAATAAAGTGAAACCTTTATTGGCTGGTGTGCCTAACCTGGCA
ATGGTAGAAAGTGTGGACAACGAGAAGATTGCAGGTCGTCTTAATCGTAT
GGTTGAAACCATGGGAAGGAAGCCTTTAAAAGTCTTGGTTCAAGTGAATA
CCAGTGGAGAAGAATATGGAGAGTGCTTCATCAAATGCTCATGGAGTCAT
AGTTGCTTATTGATGATATAACCTTTCGTCTTTCAAATTTGTAAAAATTA
GAGGTTATAGTTTATTCAAGAAAATATTTTATCACTTTTTACATGAATAA
CCTTTCGTGTCATGCATTTTACTGAATTAAGTGGTTCTGATCTGCTACTT
GTGATATTTTTGAGGCCATGCTTGATTTCTGCTATGTTGCAGCGAAATCT
GGAGTTGAGCCTTCAGGGTGTCTGGAACTTGTGAAACATGTTAGTCAAAA
CTGTCCGAATCTTGAGTTTTGTGGCCTAATGACAATTGGGATGCCAGATT
ACACATCGACCCCGGAGAACTTCAAGACATTAGCAAAATGCAGAAGTGAG
GTATGCAAGGCTCTTGGAATACCAGAAGAGCAATGTGATCTGTCTATGGG
AATGTCTGGTGACTTCGAGCTTGCTATTGAAATGGGGAGCCCAATGTCAG
GAATGGATCACCATATTTGGTGCAGGGGATATCCGAAGAAGACTAACTTT
TTTTTCACTGTTCCGAAACGTGGCTATGGTAGGATTTTCTAATGACCG
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