EY736063

Overview
NameEY736063
Unique NameEY736063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY736063_ssr324 microsatellite EY736063_ssr324:324..335. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10133 contig Csv1_Contig10133:1..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.404e-32
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 7.404e-32
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.636e-31
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 1.636e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.130e-31
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 2.130e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.614e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.614e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.614e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.614e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 3.614e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.614e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.614e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.614e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.614e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.614e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.706e-31
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 4.706e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.129e-31
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 6.129e-31
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
The following BLAST results are available for this feature:
BLAST of EY736063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
UBIQ_ARATH7.404e-3298.51Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=... [more]
UBIQ_COPCO1.636e-3197.01Ubiquitin OS=Coprinus congregatus PE=1 SV=1[more]
UBIQ_CHLRE2.130e-3197.01Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=... [more]
UBIQ_YEAST3.614e-3195.52Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1... [more]
UBIQ_SCHPO3.614e-3195.52Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=... [more]
UBIQ_KLULA3.614e-3195.52Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=... [more]
UBIQ_CRYNE3.614e-3195.52Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ... [more]
UBIQ_CANAL3.614e-3195.52Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1[more]
UBL1_ORYSJ4.706e-3195.52Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja... [more]
UBIQ_NEUCR6.129e-3195.52Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736063 ID=EY736063; Name=EY736063; organism=Citrus sinensis; type=EST; length=665bp
CCACGCGTCCGCTGAAATTTGCTGGGTCTCTCCTCATCTGCAGCCATGCA
GATCTTCGTGAAAACCCTAACGGGAAAGACATAACCCTAGAGGTCGAATC
ATCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGA
TTCCACCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGAC
GGCAGAACCCTAGCCGACTACAACATCCAAAAGGAGTCAACACTCCACCT
CGTCCTCCGTCTCCGTGGTGGCGCGAAGAAGCGTAAGAAGAAGACCTACA
CCAAGCCGAAAAAGATCAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTC
TTGCAGTTTTACAAGGTCGATGATTCTGGAAAGGTCCAGAGGCTGAGGAA
GGAGTGTCCGAATGCTGAGTGTGGAGCCGGCACCTTCATGGCTAACCACT
TTGACAGGCACTACTGCGGCAAGTGTGGACTCACCTATGTTTACCAGAAG
GCTGGCGGTGATTGATCGAGATTAGGTGGTTGTTTTGCTATTTTTAATTA
GTATTAATTACTATGGTTTTTGTGGTTCANAAATTATGACTCTTTCGTAA
TTTTGTNTGACTATATACTTGTNTGCTTGAGCGTTTTAATTAAATGGTTA
TCTGTTTTTAATTCT
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