EY736063

Overview
NameEY736063
Unique NameEY736063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY736063_ssr324 microsatellite EY736063_ssr324:324..335. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10133 contig Csv1_Contig10133:1..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.763e-30
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 1.763e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.763e-30
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 1.763e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.296e-30
Identity = 62/67 (92.54%), Postives = 66/67 (98.51%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 2.296e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.990e-30
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 2.990e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.894e-30
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 3.894e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.071e-30
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK I LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 5.071e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.071e-30
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 5.071e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.071e-30
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 5.071e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.071e-30
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 5.071e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
[Close]
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.458e-29
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 3 
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK ITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 27.335 bits (59), Expect = 1.458e-29
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12
The following BLAST results are available for this feature:
BLAST of EY736063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
UBIQ_CAMDR1.763e-3094.03Ubiquitin OS=Camelus dromedarius PE=3 SV=2[more]
UBIQ_BOVIN1.763e-3094.03Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1[more]
UBIQ_TETPY2.296e-3092.54Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]
UBIQ_SHEEP2.990e-3092.54Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2[more]
UBIQ_EIMBO3.894e-3092.54Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_TRYBB5.071e-3092.54Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1[more]
UBIQ_STRPU5.071e-3092.54Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_ENCCU5.071e-3092.54Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_DICDI5.071e-3092.54Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_PHYIN1.458e-2991.04Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736063 ID=EY736063; Name=EY736063; organism=Citrus sinensis; type=EST; length=665bp
CCACGCGTCCGCTGAAATTTGCTGGGTCTCTCCTCATCTGCAGCCATGCA
GATCTTCGTGAAAACCCTAACGGGAAAGACATAACCCTAGAGGTCGAATC
ATCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGA
TTCCACCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGAC
GGCAGAACCCTAGCCGACTACAACATCCAAAAGGAGTCAACACTCCACCT
CGTCCTCCGTCTCCGTGGTGGCGCGAAGAAGCGTAAGAAGAAGACCTACA
CCAAGCCGAAAAAGATCAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTC
TTGCAGTTTTACAAGGTCGATGATTCTGGAAAGGTCCAGAGGCTGAGGAA
GGAGTGTCCGAATGCTGAGTGTGGAGCCGGCACCTTCATGGCTAACCACT
TTGACAGGCACTACTGCGGCAAGTGTGGACTCACCTATGTTTACCAGAAG
GCTGGCGGTGATTGATCGAGATTAGGTGGTTGTTTTGCTATTTTTAATTA
GTATTAATTACTATGGTTTTTGTGGTTCANAAATTATGACTCTTTCGTAA
TTTTGTNTGACTATATACTTGTNTGCTTGAGCGTTTTAATTAAATGGTTA
TCTGTTTTTAATTCT
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