EY736063

Overview
NameEY736063
Unique NameEY736063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.899e-29
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 3
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK I LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 27.335 bits (59), Expect = 1.899e-29
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_SOLTU (40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 512
            LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY KAGGD
Sbjct:   24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_SOLLC (40S ribosomal protein S27a OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 512
            LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY KAGGD
Sbjct:   24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.863e-27
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 3
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            G  I LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   10 GTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 25.0238 bits (53), Expect = 2.863e-27
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTG T
Sbjct:    1 MQIFVKTLTGTT 12          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 3
Query:   81 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 266
            ITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    2 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_LUPAL (40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 503
            LAVLQFYKVDDSGKVQRLRKECPN ECGAGTFMANHFDRHYCGKCG TYVYQKA
Sbjct:   24 LAVLQFYKVDDSGKVQRLRKECPNTECGAGTFMANHFDRHYCGKCGKTYVYQKA 77          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: R27AB_ARATH (40S ribosomal protein S27a-2 OS=Arabidopsis thaliana GN=UBQ6 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.082e-25
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 506
            LAVLQFYKVD SGKVQRLRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct:   24 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: R27AC_ARATH (40S ribosomal protein S27a-3 OS=Arabidopsis thaliana GN=UBQ5 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.250e-25
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 506
            LAVLQFYK+D SGKVQRLRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct:   24 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.723e-24
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 3
Query:   72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272
            GK IT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:   10 GKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76          

HSP 2 Score: 27.335 bits (59), Expect = 2.723e-24
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   46 MQIFVKTLTGKT 81
            MQIFVKTLTGKT
Sbjct:    1 MQIFVKTLTGKT 12          
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_ASPOF (40S ribosomal protein S27a OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.590e-24
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 3
Query:  342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 500
            LAVLQFYKVDD+GKV RLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQK
Sbjct:   24 LAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQK 76          
The following BLAST results are available for this feature:
BLAST of EY736063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
UBIQ_LEIMA1.899e-2991.04Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1[more]
RS27A_SOLTU5.240e-2896.4940S ribosomal protein S27a OS=Solanum tuberosum GN... [more]
RS27A_SOLLC5.240e-2896.4940S ribosomal protein S27a OS=Solanum lycopersicum... [more]
UBIQ_LEITA2.863e-2788.06Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3... [more]
UBIQ_LUMTE2.875e-2695.16Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ... [more]
RS27A_LUPAL1.093e-2596.3040S ribosomal protein S27a OS=Lupinus albus PE=3 S... [more]
R27AB_ARATH7.082e-2592.7340S ribosomal protein S27a-2 OS=Arabidopsis thalia... [more]
R27AC_ARATH9.250e-2590.9140S ribosomal protein S27a-3 OS=Arabidopsis thalia... [more]
UBIL_NPVOP2.723e-2476.12Ubiquitin-like protein OS=Orgyia pseudotsugata mul... [more]
RS27A_ASPOF4.590e-2494.3440S ribosomal protein S27a OS=Asparagus officinali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736063 ID=EY736063; Name=EY736063; organism=Citrus sinensis; type=EST; length=665bp
CCACGCGTCCGCTGAAATTTGCTGGGTCTCTCCTCATCTGCAGCCATGCA
GATCTTCGTGAAAACCCTAACGGGAAAGACATAACCCTAGAGGTCGAATC
ATCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGA
TTCCACCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGAC
GGCAGAACCCTAGCCGACTACAACATCCAAAAGGAGTCAACACTCCACCT
CGTCCTCCGTCTCCGTGGTGGCGCGAAGAAGCGTAAGAAGAAGACCTACA
CCAAGCCGAAAAAGATCAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTC
TTGCAGTTTTACAAGGTCGATGATTCTGGAAAGGTCCAGAGGCTGAGGAA
GGAGTGTCCGAATGCTGAGTGTGGAGCCGGCACCTTCATGGCTAACCACT
TTGACAGGCACTACTGCGGCAAGTGTGGACTCACCTATGTTTACCAGAAG
GCTGGCGGTGATTGATCGAGATTAGGTGGTTGTTTTGCTATTTTTAATTA
GTATTAATTACTATGGTTTTTGTGGTTCANAAATTATGACTCTTTCGTAA
TTTTGTNTGACTATATACTTGTNTGCTTGAGCGTTTTAATTAAATGGTTA
TCTGTTTTTAATTCT
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