EY736063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.723e-23 Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 72 GKDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 272 GK IT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 10 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 26.9498 bits (58), Expect = 1.723e-23 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 46 MQIFVKTLTGKT 81 MQIF+KTLTGKT Sbjct: 1 MQIFIKTLTGKT 12
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_HORVU (40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 3 Query: 342 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 503 LAVLQFYKVDD+ GKV RLRKECPNA+CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_ORYSJ (40S ribosomal protein S27a OS=Oryza sativa subsp. japonica GN=UBQ6 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 342 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 503 LAVLQFYKVDD+ GKV RLRKECPN +CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_MAIZE (40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 342 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 503 LAVLQFYKVDD+ GKV RLRKECPN ECGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: R27AA_ARATH (40S ribosomal protein S27a-1 OS=Arabidopsis thaliana GN=UBQ15 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 503 LAVLQFYKVD SGKVQRL+KECP+ CG GTFMA+HFDRHYCGKCG TYV++KA Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_DAUCA (40S ribosomal protein S27a (Fragment) OS=Daucus carota PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGK 473 LAVLQFYKVD+SGKVQRLRKECPN ECGAGTFMANHFDRHYCGK Sbjct: 24 LAVLQFYKVDESGKVQRLRKECPNGECGAGTFMANHFDRHYCGK 67
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_CHICK (40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 500 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_HUMAN (40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 500 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_CAVPO (40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 500 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of EY736063 vs. ExPASy Swiss-Prot
Match: RS27A_BOVIN (40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 342 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 500 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76 The following BLAST results are available for this feature:
BLAST of EY736063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736063 ID=EY736063; Name=EY736063; organism=Citrus sinensis; type=EST; length=665bpback to top |