DR908565

Overview
NameDR908565
Unique NameDR908565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.178e-49
Identity = 92/134 (68.66%), Postives = 113/134 (84.33%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTR-VPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+G RD+EIAMG +QP HL+T+ + ARGQIHGFRMSLWYEHLGML D FL PES ECV++VN++A++YWDLY+S+ L  DLPGHLL YP+ V+ EG VTELPG +FFPDT+A V+GTK + +PP LTT
Sbjct:  685 NINQRSMDGGRDSEIAMGAFQPCHLNTKGLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGN-LPPFLTT 817          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.352e-39
Identity = 78/137 (56.93%), Postives = 96/137 (70.07%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEH--DLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+G RDTEIAMG YQP HL +    R  GQI  FR+SLW EHL +  + F  PES EC++ VN  A+  W LYS++      DLPGHLL YPI +   G+VT L GTEFFPDT A+V+G KS+Y+PP+LT+
Sbjct:  684 NINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVGEKSNYLPPILTS 820          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.183e-33
Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 367
            NINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+  LDD F QPES ECV+KV  + ER W  +++E +  D+ GHLL+YP+ V  +G V  LPG+E FPD    ++GT
Sbjct:  835 NINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVS-DMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGT 957          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.668e-33
Identity = 66/124 (53.23%), Postives = 90/124 (72.58%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 367
            NINQRS+EG RDTEIAMGGYQP+H   +  +R  GQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++PGHLL+YP+ V   G V+ LPG E FPD   +++G+
Sbjct:  734 NINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVT-EMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGS 856          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.308e-32
Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPA--RGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 367
            NINQRSMEG RDTEIAMG YQP H   R  +  RGQI+G+RMSLW EH+ +LDD F++PES  CV+KV  +AE  W+ + SE +  ++ GHL++YP+ V  +G V  LPG+E FPD    V+G+
Sbjct:  783 NINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVS-EMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGS 905          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.806e-32
Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 367
            NINQRS+EG RDTEIAMGGYQP+H   +  +R  GQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++ GHLL+YP+ V   G V+ LPG E FPD   +++G+
Sbjct:  724 NINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVT-EMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGS 846          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.177e-31
Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPAR--GQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGT 367
            NINQRS+EG RDTEIAMGGYQP++      +R  GQI G+RMSLW EHLG L+  F +PE+ ECV++V Q++E  W  Y++E +  ++ GHLL+YP+ V   G V+ LPG E FPD   +++G+
Sbjct:  726 NINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVT-EMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGS 848          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.727e-30
Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHL---STRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM G +DTEIAMG YQP H      R P RGQ++G+RMSLW EHLG   D F++P   EC+KKVN I+E  W  +       +L GHL++YP+ V  +G V+ LP  E FPD   +++G  S  +P  LTT
Sbjct:  735 NINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHP-RGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFS-ELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLTT 868          
BLAST of DR908565 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.952e-26
Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 2
Query:    2 NINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLG---MLDD-TFLQPESSECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 400
            NINQRSM+G RDTEIA+G YQ     T      +I  +R+SLWYEH G     DD +  +PES ECV+ +  I E+ W++YS + +   L  HL+ YPI V+G+G V E+ G   FPDTK  V G +S   PPVLTT
Sbjct:  632 NINQRSMDGCRDTEIAIGCYQ-----TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTKTLVKGKRSKMFPPVLTT 762          
The following BLAST results are available for this feature:
BLAST of DR908565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDA2_ORYSJ1.178e-4968.66Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDZ1_ARATH9.352e-3956.93Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDB1_ARATH1.183e-3356.45Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDG3_ARATH7.668e-3353.23Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDB2_ARATH1.308e-3254.03Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG2_ARATH3.806e-3252.42Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG1_ARATH7.177e-3151.61Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH2.727e-3049.26Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDE1_ARATH6.952e-2648.18Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16693 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-36_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908565 ID=DR908565; Name=DR908565; organism=Citrus sinensis; type=EST; length=602bp
CAACATCAACCAGCGATCAATGGAGGGTGCTAGGGACACTGAGATAGCCA
TGGGAGGCTACCAACCATATCATTTGTCAACCAGGGTGCCAGCACGAGGC
CAGATACACGGCTTCCGTATGTCACTATGGTACGAGCACCTAGGCATGCT
CGATGACACCTTCCTCCAGCCAGAAAGTAGCGAATGTGTTAAGAAGGTTA
ACCAGATTGCCGAACGGTATTGGGACCTGTACTCCAGTGAGTCTCTTGAG
CATGACTTGCCCGGTCACTTGCTCCGCTACCCTATTGGTGTTTCTGGTGA
AGGAGATGTCACGGAGTTGCCAGGAACTGAGTTCTTCCCCGACACCAAGG
CTCGTGTTCTCGGTACCAAATCAGATTATATGCCCCCAGTCCTGACCACC
TGATGCTCTCCAGAGGGTGCCAAAAATAATTTCGTAGTTGCGAACTACCG
GTTATGGTAGTATAGCAAATAATAAATGATGTGTATTAAAACCAACAGGT
GTGGTATTGTTTTTCTGCTTTGGTTCAGAGATGTGGTGTGATTTGGTGAT
ATACTGACGGGAAACTTATTAAGTCTGTTTATTTGTGCATTAAAAAAAAA
AA
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