DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_AURPU (Orotidine 5'-phosphate decarboxylase OS=Aureobasidium pullulans GN=URA3 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21
Identity = 63/138 (45.65%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPAS-WPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            HI  GP I+                 AEMSSAGNL  G YT   V  A  + +FV+GFI+    +  PG      FI  TPGVQ+   GD LGQQYNTP  VI + G+DIIIVGRG+  A D    A EYR++ W+AY
Sbjct:  127 HIFPGPAIITALSQARPRCRQLLIL-AEMSSAGNLMTGSYTEQCVVEARKNPEFVMGFIAQRTLNEQPG----DNFITMTPGVQIGATGDGLGQQYNTPEKVIGEAGTDIIIVGRGVYGAQDKRAKAEEYRVRAWKAY 259          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASPFU (Orotidine 5'-phosphate decarboxylase OS=Aspergillus fumigatus GN=pyrG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G+YT A+V  A  + +FV+GF+S    +   + V+ A     F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA+ Y+ +GWEAY+A+
Sbjct:  156 AEMTSKGSLATGEYTKASVDYARKYKNFVMGFVSTRALTEVQSDVSSASEDEDFVVFTTGVNLSSKGDKLGQQYQTPASAI-GRGADFIIAGRGIYAAPDPVEAAQRYQKEGWEAYMAR 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_TRIRE (Orotidine 5'-phosphate decarboxylase OS=Trichoderma reesei GN=ura3 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21
Identity = 57/122 (46.72%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVK-----------GGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            A+MSS GN    +YT A+V+ A +H DFV+GFIS    +      + AFI  TPG Q+             GGD  GQQYNTP+ +I   GSDI IVGRGI+KA+DP   A  YR   W+AY
Sbjct:  257 AQMSSQGNFMNKEYTQASVEAAREHKDFVMGFISQETLN---TEPDDAFIHMTPGCQLPPEDEDQQTNGSVGGDGQGQQYNTPHKLIGIAGSDIAIVGRGILKASDPVEEAERYRSAAWKAY 375          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASPKA (Orotidine 5'-phosphate decarboxylase OS=Aspergillus kawachi GN=pyrG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21
Identity = 56/119 (47.06%), Postives = 73/119 (61.34%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT ++V  A    +FV+GF+S  P     + V+       F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA++Y+ +GWEAYLA+
Sbjct:  156 AEMTSKGSLATGQYTTSSVDYARKSKNFVMGFVSTRPLGEVQSEVSSPSDEEDFVVFTTGVNISSKGDKLGQQYQTPASAI-GRGADFIIAGRGIYAAPDPVQAAQQYQKEGWEAYLAR 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_TRIAT (Orotidine 5'-phosphate decarboxylase OS=Trichoderma atroviride GN=pyr4 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21
Identity = 56/122 (45.90%), Postives = 69/122 (56.56%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVK-----------GGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            A+MSS GN   G+YT A V+ A +H DFV+GFIS    +      +  FI  TPG Q+             GGD  GQQYNT + +I   GSDI IVGRGI+KA+DP   A  YR   W+AY
Sbjct:  255 AQMSSEGNFMTGEYTQACVEAAREHKDFVMGFISQEALN---TQADDDFIHMTPGCQLPPEDEDQQTNGKVGGDGQGQQYNTAHKIIGIAGSDIAIVGRGILKASDPVEEAERYRSAAWKAY 373          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASPNG (Orotidine 5'-phosphate decarboxylase OS=Aspergillus niger GN=pyrG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT ++V  A  + +FV+GF+S        + V+       F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA++Y+ +GWEAYLA+
Sbjct:  156 AEMTSKGSLATGQYTTSSVDYARKYKNFVMGFVSTRSLGEVQSEVSSPSDEEDFVVFTTGVNISSKGDKLGQQYQTPASAI-GRGADFIIAGRGIYAAPDPVQAAQQYQKEGWEAYLAR 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASPAW (Orotidine 5'-phosphate decarboxylase OS=Aspergillus awamori GN=pyrG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT ++V  A  + +FV+GF+S        + V+       F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA++Y+ +GWEAYLA+
Sbjct:  156 AEMTSKGSLATGQYTTSSVDYARKYKNFVMGFVSTRSLGEVQSEVSSPSDEEDFVVFTTGVNISSKGDKLGQQYQTPASAI-GRGADFIIAGRGIYAAPDPVQAAQQYQKEGWEAYLAR 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_RHIRA (Orotidine 5'-phosphate decarboxylase OS=Rhizomucor racemosus GN=pyrG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20
Identity = 58/141 (41.13%), Postives = 77/141 (54.61%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALA-AREYRLQGWEAYLAK 421
            H + G GI+                 AEMSS G L KG YT+ +V++A  + DFV GFI+ +  +      +  F+  +PGV +   GD LGQQY TP+ VI + G DIIIVGRGI    D   A A+ YR  GW+AYL +
Sbjct:  122 HTVPGEGIIKGLGEVGLPLGRGLLLLAEMSSKGALTKGSYTSESVEMARRNKDFVFGFIAQHKMNEHD---DEDFVVMSPGVGLDVKGDGLGQQYRTPHEVIVESGGDIIIVGRGIYGNPDQVEAQAKRYRQAGWDAYLER 259          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_RHIOR (Orotidine 5'-phosphate decarboxylase OS=Rhizopus oryzae GN=pyrG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPAL-AAREYRLQGWEAYLAK 421
            H + G GI+                 AEMSS G L KG YT  +V++A  + DFV GFI+ N  +      +  FI  +PGV +   GD LGQQY TP  VI + G+D+IIVGRGI    D  +  A+ YR  GW+AYL +
Sbjct:  122 HTVPGEGIIKGLAEVGLPLGRGLLLLAEMSSKGALTKGSYTTDSVEMARRNKDFVFGFIAQNKMNQYD---DEDFIVMSPGVGLDVKGDGLGQQYRTPREVIVESGADVIIVGRGIYGQPDKLVEQAQRYRQAGWDAYLER 259          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_RHINI (Orotidine 5'-phosphate decarboxylase OS=Rhizopus niveus GN=PYR4 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPAL-AAREYRLQGWEAYLAK 421
            H + G GI+                 AEMSS G L KG YT  +V++A  + DFV GFI+ N  +      +  FI  +PGV +   GD LGQQY TP  VI + G+D+IIVGRGI    D  +  A+ YR  GW+AYL +
Sbjct:  122 HTVPGEGIIKGLAEVGLPLGRGLLLLAEMSSKGALTKGSYTTDSVEMARRNKDFVFGFIAQNKMNQYD---DEDFIVMSPGVGLDVKGDGLGQQYRTPREVIVESGADVIIVGRGIYGQPDKLVEQAQRYRQAGWDAYLER 259          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_AURPU1.081e-2145.65Orotidine 5'-phosphate decarboxylase OS=Aureobasid... [more]
PYRF_ASPFU1.844e-2147.06Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_TRIRE2.408e-2146.72Orotidine 5'-phosphate decarboxylase OS=Trichoderm... [more]
PYRF_ASPKA2.408e-2147.06Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_TRIAT7.007e-2145.90Orotidine 5'-phosphate decarboxylase OS=Trichoderm... [more]
PYRF_ASPNG9.151e-2146.22Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_ASPAW9.151e-2146.22Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_RHIRA2.039e-2041.13Orotidine 5'-phosphate decarboxylase OS=Rhizomucor... [more]
PYRF_RHIOR3.477e-2041.13Orotidine 5'-phosphate decarboxylase OS=Rhizopus o... [more]
PYRF_RHINI3.477e-2041.13Orotidine 5'-phosphate decarboxylase OS=Rhizopus n... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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