DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PHYBL (Orotidine 5'-phosphate decarboxylase OS=Phycomyces blakesleeanus GN=pyrG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.542e-20
Identity = 58/142 (40.85%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPAS-WPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALA-AREYRLQGWEAYLAK 421
            H + G GI+                 AEMSS G L KG YT  +V++A  + DFV GFI+ +  + +P    +  F+  TPGV +   GD LGQQY TP+ VI + G D+IIVGRGI    D   A ++ YR  GW AYL +
Sbjct:  124 HTVPGEGIIKGLGEVGLPLGRGLLLLAEMSSKGALTKGSYTTESVEMARRNKDFVFGFIAQHKMNEYP----DEDFVVMTPGVGLDIKGDGLGQQYRTPHEVIVESGCDVIIVGRGIYGKPDEVEAQSKRYREAGWNAYLER 261          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ZYGBA (Orotidine 5'-phosphate decarboxylase OS=Zygosaccharomyces bailii GN=URA3 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 62/146 (42.47%), Postives = 77/146 (52.74%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXX---AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS 427
            H ++GPGIV                    AE+SS G+LA G+YT   V+IA+   DFVIGFI+       G      ++  TPGV +    D LGQQY T   VI   GSDIIIVGRG+  K  DP +    YR  GWEAYL +C+
Sbjct:  122 HGVTGPGIVQGLKQAAEETTQEPRGLLMLAELSSKGSLAHGEYTKGTVEIAKTDKDFVIGFIAQRDMG--GRDEGYDWLIMTPGVGLEDKSDALGQQYRTVEDVI-STGSDIIIVGRGLFGKGRDPKIEGDRYRKAGWEAYLKRCN 264          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_SCHPO (Orotidine 5'-phosphate decarboxylase OS=Schizosaccharomyces pombe GN=ura4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19
Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAA-DPALAAREYRLQGWEAYLAKCS 427
            H + G GI+                 AEMSS G+LA G YT   ++  E H+DF  GFI+     +P   +   +I  +PG+ +   GD LGQQY TP  VI + GSDIIIVGRG+  A  +P + A+ YR  GW+AY  + S
Sbjct:  124 HTVPGEGIIQGLKEVGLPLGRGLLLLAEMSSKGSLATGSYTEKTLEWFEKHTDFCFGFIAGR--RFPN--LQSDYITMSPGIGLDVKGDGLGQQYRTPEEVIVNCGSDIIIVGRGVYGAGRNPVVEAKRYREAGWKAYQQRLS 262          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_RHIPU (Orotidine 5'-phosphate decarboxylase OS=Rhizomucor pusillus GN=PYR4 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19
Identity = 56/141 (39.72%), Postives = 73/141 (51.77%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADP-ALAAREYRLQGWEAYLAK 421
            H + G GI+                 AEMSS G L KG YT  +V++A  + DFV GFI+ +  +      +  F+   PGV +   GD LGQQY TPY VI + G D+IIVGRGI    D     A+ Y+  GW AYL +
Sbjct:  122 HTVPGEGIITGLREVGLPLGRGLLLLAEMSSKGALTKGSYTTESVEMARRNQDFVFGFIAQHKMNEKD---DEDFVVMAPGVGLDVKGDGLGQQYRTPYQVIVESGCDVIIVGRGIYGNPDQIEFQAKRYKEAGWNAYLER 259          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PACTA (Orotidine 5'-phosphate decarboxylase OS=Pachysolen tannophilus GN=URA3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+YT   V+IA+   DFVIGFI+ +     G      +I  TPGV +   GD LGQQY T   VI D GSDIIIVGRG+  K  DP L    YR  GW+AYL +
Sbjct:  153 AELSSKGSLAYGEYTNKTVEIAKSDKDFVIGFIAQHDMG--GREEGFDWIIMTPGVGLDDKGDKLGQQYRTVDQVI-DSGSDIIIVGRGLFGKGRDPVLQGERYRKAGWDAYLKR 264          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASPOR (Orotidine 5'-phosphate decarboxylase OS=Aspergillus oryzae GN=pyrG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G+LA G YT ++V  A  +  FV+GF+S        + V+       F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  A DP  AA++Y+ +GW+AYL +
Sbjct:  156 AEMTSKGSLATGQYTTSSVDYARKYKKFVMGFVSTRHLGEVQSEVSSPSEEEDFVVFTTGVNLSSKGDKLGQQYQTPESAV-GRGADFIIAGRGIYAAPDPVEAAKQYQKEGWDAYLKR 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_SCHCO (Orotidine 5'-phosphate decarboxylase OS=Schizophyllum commune GN=URA1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPV-----NPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-----KAADPALAAREYRLQGWEAYLAK 421
            H + GP I+                 AEMS+ G+LA G YT AAV++A ++  FVIGFI+       GAP      +  F+  TPGV +   GD +GQQY TP  V+ + G D+IIVGRGI      K  +    A  Y+  GW AY+ +
Sbjct:  124 HPVPGPSIISGLASVGQPLGRGLLLLAEMSTKGSLATGAYTEAAVQMARENRGFVIGFIAQRRMDGIGAPPGVNVEDEDFLVLTPGVGLDVKGDGMGQQYRTPKQVVQEDGCDVIIVGRGIYGKDPSKVEEIRRQAERYQAAGWAAYIER 273          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_DICDI (Uridine 5'-monophosphate synthase OS=Dictyostelium discoideum GN=pyr56 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            H ++G  IVD                A+MSS G+L  GDYT   +++A ++ + V+G I           +    +  TPGVQ    GD +GQQYNTP  +I ++ +D+IIVGRGI ++ DP   A +YR   WE Y +K
Sbjct:  342 HGVAGSSIVDGFKSGLKEYGSGLLLLAQMSSKGSLCVGDYTTQMIEMANNNKEEVMGLICQERLP----SMTDGLVLMTPGVQFNSTGDAMGQQYNTPEYIIKEKNTDVIIVGRGIYQSNDPKSVANKYRTAAWETYQSK 477          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_EMENI (Orotidine 5'-phosphate decarboxylase OS=Emericella nidulans GN=pyrG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.944e-19
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASW---PGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            AEM+S G+LA G+YTA +V+ A  +  FV+GF+S    S         +  F+  T GV +   GD LGQQY TP S +  RG+D II GRGI KA DP  A + YR +GW+AY
Sbjct:  156 AEMTSKGSLATGEYTARSVEYARKYKGFVMGFVSTRALSEVLPEQKEESEDFVVFTTGVNLSDKGDKLGQQYQTPGSAV-GRGADFIIAGRGIYKADDPVEAVQRYREEGWKAY 268          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ASHGO (Orotidine 5'-phosphate decarboxylase OS=Ashbya gossypii GN=URA3 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.845e-19
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 2
Query:    2 HIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            H ++GPG++                    AE+SS G+LA+GDYTA  V++A+   DFVIGFI+       G      ++  TPGV +   GD LGQQY T   V+ D G+D+IIVGRG+  K  DP +    YR  GWEAYL +
Sbjct:  122 HGVTGPGVIAGLKEAAKLASQEPRGLLMLAELSSQGSLARGDYTAGVVEMAKLDKDFVIGFIAQRDMG--GRADGFDWLIMTPGVGLDDKGDGLGQQYRTVDEVVSD-GTDVIIVGRGLFDKGRDPNVEGARYRKAGWEAYLRR 262          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_PHYBL4.542e-2040.85Orotidine 5'-phosphate decarboxylase OS=Phycomyces... [more]
PYRF_ZYGBA1.012e-1942.47Orotidine 5'-phosphate decarboxylase OS=Zygosaccha... [more]
PYRF_SCHPO1.321e-1939.86Orotidine 5'-phosphate decarboxylase OS=Schizosacc... [more]
PYRF_RHIPU1.321e-1939.72Orotidine 5'-phosphate decarboxylase OS=Rhizomucor... [more]
PYRF_PACTA1.726e-1950.43Orotidine 5'-phosphate decarboxylase OS=Pachysolen... [more]
PYRF_ASPOR1.726e-1943.70Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_SCHCO2.254e-1938.00Orotidine 5'-phosphate decarboxylase OS=Schizophyl... [more]
PYR5_DICDI2.254e-1936.43Uridine 5'-monophosphate synthase OS=Dictyostelium... [more]
PYRF_EMENI2.944e-1946.49Orotidine 5'-phosphate decarboxylase OS=Emericella... [more]
PYRF_ASHGO3.845e-1940.97Orotidine 5'-phosphate decarboxylase OS=Ashbya gos... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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