DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PARBR (Orotidine 5'-phosphate decarboxylase OS=Paracoccidioides brasiliensis GN=URA3 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18
Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA------FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            AEM+S G++A G YT  +V+ A  H  FV+GF++    +    PV+        F+  T GV +   GD LGQQY TP S + +RG+D II GRGI  A DP  A   YR +GW+AYL +
Sbjct:  162 AEMTSKGSMATGAYTQLSVEAARRHRAFVLGFVATRALN-DVLPVSTVDGDEEDFVVFTTGVSLSASGDALGQQYQTPTSAV-ERGADFIISGRGIYAAEDPLEAVLRYREEGWKAYLER 279          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_HANFA (Orotidine 5'-phosphate decarboxylase OS=Hansenula fabianii GN=URA3 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18
Identity = 55/116 (47.41%), Postives = 67/116 (57.76%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKC 424
            AE+SS G+LA G+YT   V IA+   DFVIGFI+       G      ++  TPGV +   GD LGQQY     V+   GSDIIIVGRG+  K  DPA+    YR  GW AYL +C
Sbjct:  152 AELSSKGSLATGEYTKQTVDIAKTDKDFVIGFIAQRDMG--GHDEGFDWLIMTPGVGLDDKGDGLGQQYRGVDEVVAG-GSDIIIVGRGLFGKGRDPAVEGERYRSAGWNAYLKRC 264          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_SOLCC (Orotidine 5'-phosphate decarboxylase OS=Solorina crocea GN=PYRG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 56/116 (48.28%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA-----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            AEM++ G  A G YT A+++ A+ HS FVIGFIS N A        PA     FI  T GV     GD LGQQY TP + I  RG+D II GRGI   +DP  AA+ Y+ +GW AY
Sbjct:  156 AEMTTRGTFATGAYTKASIESAKKHSSFVIGFIS-NQALTSIETQIPATHMEDFIVFTTGVNRATKGDPLGQQYQTPEAAI-KRGADFIISGRGIYATSDPIQAAKLYQNEGWAAY 269          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PICPA (Orotidine 5'-phosphate decarboxylase OS=Pichia pastoris GN=URA3 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAY 412
            AE+SS G++A G YT   V+IA+   +FVIGFI+ N  S  G      +I  TPGV +   GD LGQQY T  S ++  G+DIIIVGRG+  K  DP      YR  GWEAY
Sbjct:  150 AELSSKGSIAHGKYTEETVEIAKSDKEFVIGFIAQN--SMGGQDEGFDWIIMTPGVGLDDTGDALGQQYRT-VSQVFSTGTDIIIVGRGLFGKGRDPLKEGERYRKAGWEAY 258          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANBO (Orotidine 5'-phosphate decarboxylase OS=Candida boidinii GN=URA3 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18
Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G +A G YT   V+IA+   DFVIGFI+ N     G+     +I  TPGV +   GD LGQQY T  S +   G+DIIIVGRG+  K  DP++    Y   GW AYLA+
Sbjct:  155 AELSSKGAIAHGKYTEETVEIAKTDKDFVIGFIAQNQMG--GSDEGFDWIIMTPGVGLDDKGDALGQQYRT-VSEVMSTGTDIIIVGRGLFGKGRDPSVEGERYMKAGWNAYLAR 266          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PICST (Orotidine 5'-phosphate decarboxylase OS=Pichia stipitis GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 54/117 (46.15%), Postives = 68/117 (58.12%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS 427
            AE+SS G++A G YT   V+IA+   +FVIGFI+       G      +I  TPGV +   GD LGQQY T   V+   G+DIIIVGRG+  K  DP +  + YR  GW AYL K S
Sbjct:  152 AELSSKGSIAHGKYTEETVEIAKTDKEFVIGFIAQRDMG--GQDEGFDWIVMTPGVGLDDKGDSLGQQYRTVDEVV-STGTDIIIVGRGLFGKGRDPDVEGQRYREAGWNAYLKKTS 265          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANGA (Orotidine 5'-phosphate decarboxylase OS=Candida glabrata GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+YT   V IA+   DFVIGFI+       G      ++  TPGV +   GD LGQQY T    ++  G+DIIIVGRG+  K  DP      YR  GW+AYL +
Sbjct:  151 AELSSKGSLAHGEYTKGTVDIAKSDKDFVIGFIAQKDMG--GRDEGFDWLIMTPGVGLDDKGDALGQQYRT-VDEVFSTGTDIIIVGRGLFAKGRDPKTEGERYRKAGWDAYLKR 262          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANPA (Orotidine 5'-phosphate decarboxylase OS=Candida parapsilosis GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+Y+   + IA+   DFV+GFI+ N     G      ++  TPGV +   GD+LGQQY T   VI  +G+D+IIVGRG+  K  DP +  + Y+  GW AYL +
Sbjct:  152 AELSSKGSLAYGEYSKKTIDIAKTDKDFVMGFIAQNYMG--GTDEGFDWVIMTPGVGLDDKGDNLGQQYRTVDEVI-SKGTDVIIVGRGLFGKGRDPVVEGKRYKEAGWNAYLKR 263          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANDC (Orotidine 5'-phosphate decarboxylase OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+Y+   V+IA+   +FVIGFI+       G      +I  TPGV +   GD LGQQY T   V+   G+DIIIVGRG+  K  DP +  + YR  GW AYL K
Sbjct:  155 AELSSVGSLAYGEYSQKTVEIAKSDKEFVIGFIAQRDMG--GQEEGFDWIIMTPGVGLDDKGDGLGQQYRTVNEVV-STGTDIIIVGRGLFGKGRDPEVEGKRYRDAGWNAYLKK 266          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_DEBHA (Orotidine 5'-phosphate decarboxylase OS=Debaryomyces hansenii GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+YT   ++IA+   +FVIGFI+       G      +I  TPGV +   GD LGQQY T   V+   G+DIIIVGRG+  +  DP +  + YR  GW AYL K
Sbjct:  152 AELSSKGSLAYGEYTEKTIEIAKSDKEFVIGFIAQRDMG--GTDEGFDWIVMTPGVGLDDKGDGLGQQYRTVDQVV-TTGTDIIIVGRGLFGQGRDPTVEGKRYRDAGWNAYLKK 263          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_PARBR5.552e-1843.33Orotidine 5'-phosphate decarboxylase OS=Paracoccid... [more]
PYRF_HANFA5.552e-1847.41Orotidine 5'-phosphate decarboxylase OS=Hansenula ... [more]
PYRF_SOLCC7.251e-1848.28Orotidine 5'-phosphate decarboxylase OS=Solorina c... [more]
PYRF_PICPA7.251e-1848.21Orotidine 5'-phosphate decarboxylase OS=Pichia pas... [more]
PYRF_CANBO9.470e-1846.96Orotidine 5'-phosphate decarboxylase OS=Candida bo... [more]
PYRF_PICST2.110e-1746.15Orotidine 5'-phosphate decarboxylase OS=Pichia sti... [more]
PYRF_CANGA2.110e-1745.22Orotidine 5'-phosphate decarboxylase OS=Candida gl... [more]
PYRF_CANPA2.755e-1743.48Orotidine 5'-phosphate decarboxylase OS=Candida pa... [more]
PYRF_CANDC2.755e-1746.09Orotidine 5'-phosphate decarboxylase OS=Candida du... [more]
PYRF_DEBHA3.599e-1745.22Orotidine 5'-phosphate decarboxylase OS=Debaryomyc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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