DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANTR (Orotidine 5'-phosphate decarboxylase OS=Candida tropicalis GN=URA3 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+YT   ++IA+   +FVIGFI+       G      +I  TPGV +   GD LGQQY T   VI   G+D+IIVGRG+  K  DP +  + YR  GW AYL K
Sbjct:  152 AELSSKGSLAYGEYTNKTIEIAKSDKEFVIGFIAQRDMG--GHDQGFDWIIMTPGVGLDDKGDALGQQYRTVDEVI-STGTDVIIVGRGLFGKGRDPEVEGKRYREAGWNAYLKK 263          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PICAN (Orotidine 5'-phosphate decarboxylase OS=Pichia angusta GN=URA3 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAY 412
            AE+SS G+LA G+YT   V+IA+   +FVIGFI+       G      ++  TPGV +   GD LGQQY T   V+   G+D+IIVGRG+  K  DP +  + YR  GWEAY
Sbjct:  150 AELSSKGSLATGEYTQKTVEIAKSDKEFVIGFIAQRDMG--GREEGFDWLIMTPGVGLDDKGDSLGQQYRTVDEVM-QTGTDVIIVGRGLFGKGRDPEVEGKRYRNAGWEAY 258          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_ENDMA (Orotidine 5'-phosphate decarboxylase OS=Endomyces magnusii GN=URA3 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPAS--WPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAY 412
            AE+SS G+LA G YT   V++A ++SDFV GFI+ N              ++  TPGV +   GD LGQQY T  +VI   GSD+IIVGRG+  K  DP +  + YR  GW+AY
Sbjct:  167 AELSSKGSLATGSYTTKTVELAHNNSDFVFGFIAQNRMEEVQDSEGNYEDWLILTPGVGLDDKGDGLGQQYRTVDTVI-KNGSDVIIVGRGLFGKGRDPVVEGKRYRDAGWKAY 279          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANAL (Orotidine 5'-phosphate decarboxylase OS=Candida albicans GN=URA3 PE=3 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+Y+   V+IA+   +FVIGFI+       G      ++  TPGV +   GD LGQQY T   V+   G+DIIIVGRG+  K  DP +  + YR  GW AYL K
Sbjct:  155 AELSSVGSLAYGEYSQKTVEIAKSDKEFVIGFIAQRDMG--GQEEGFDWLIMTPGVGLDDKGDGLGQQYRTVDEVV-STGTDIIIVGRGLFGKGRDPDIEGKRYRDAGWNAYLKK 266          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYR5_DROME (Uridine 5'-monophosphate synthase OS=Drosophila melanogaster GN=r-l PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            AEMS++GNL    Y   + KIA + +D  + F++        A   P  +Q TPGV++ +G D LGQQY +P  V+ +RG+DI +VGRGI+KA+ P  AA+ YR + W AY
Sbjct:  379 AEMSASGNLIDAKYKENSNKIATEGAD--VDFVAGVVCQSSDAFAFPGLLQLTPGVKIDEGVDQLGQQYQSPEHVVKERGADIGVVGRGILKASSPKQAAQTYRDRLWAAY 487          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANMA (Orotidine 5'-phosphate decarboxylase OS=Candida maltosa GN=URA3 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXX---AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            H ++G G+VD                   AE+SS G+LA G+YT   V+IA+   +FVIGFI+       G      +I  TPGV +   GD LGQQY T   V+   G+D+IIVGRG+  K  DP +  + YR  GW AYL +
Sbjct:  123 HGVTGAGVVDGLKQGALETTKEPRGLLMLAELSSKGSLAYGEYTEKTVEIAKLDKEFVIGFIAQRDMG--GHDEGFDWIVMTPGVGLDDKGDGLGQQYRTVDEVV-STGTDVIIVGRGLFGKGRDPEVEGKRYRDAGWNAYLKR 263          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_USTMA (Orotidine 5'-phosphate decarboxylase OS=Ustilago maydis GN=PYR6 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 59/156 (37.82%), Postives = 76/156 (48.72%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXXAEMSSAGNLAKGDYTAAAVKIA-EDHSDFVIGFISVNPASW-PGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKA-------ADPALA-------AREYRLQGWEAYLAK 421
            H++ GP ++                 AEMSS G L KGDYT A V  A +D + FV GFI+++       A  +   +  TPGV +   GD LGQQY TP  VI + G D+IIVGRGI  A       AD   A          Y+  GW+AYL +
Sbjct:  124 HLVPGPSVISGLAKVGQPLGRGLLLLAEMSSEGALTKGDYTQACVDEAHKDTTGFVCGFIAMSRVDERERANTHRDLLILTPGVGLDVKGDGLGQQYRTPDQVIRESGCDVIIVGRGIYGALTTEEGKADKKAAFAKVSEQGERYKTAGWDAYLKR 279          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_YAMOH (Orotidine 5'-phosphate decarboxylase OS=Yamadazyma ohmeri GN=URA3 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAY 412
            AE+SS G+LA G+YT   V+IA+   +FV+GFI+       G      ++  TPGV +   GD LGQQY T   VI   G+DIIIVGRG+  K  DP +  + YR  GW+AY
Sbjct:  148 AELSSKGSLAYGEYTEKTVEIAKSDKEFVVGFIAQRDMG--GRDEGFDWLIMTPGVGLDDKGDALGQQYRTVNEVI-STGTDIIIVGRGLFGKGRDPEVEGKRYRDAGWKAY 256          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_PICJA (Orotidine 5'-phosphate decarboxylase OS=Pichia jadinii GN=URA3 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 53/117 (45.30%), Postives = 65/117 (55.56%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS 427
            AE+SS G+ A G YT   V+IA+   DF IGFI+       G      +I  TPGV +   GD LGQQY T   V+   G DIIIVGRG+  K  DP +    YR  GW+AYL + S
Sbjct:  151 AELSSKGSFAHGTYTEETVEIAKTDKDFCIGFIAQRDMG--GREDGFDWIIMTPGVGLDDKGDSLGQQYRTVDEVV-SGGCDIIIVGRGLFGKGRDPTVEGERYRKAGWDAYLKRYS 264          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CANGY (Orotidine 5'-phosphate decarboxylase OS=Candida glycerinogenes GN=URA3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYL 415
            AE+SS G+LA G+YT   V+IA+   +FVIGFI+ +     G      +I  TPGV +   GD LGQQY T   V+   G+DIIIVGRG+  +  DP   A+ Y+  GW AYL
Sbjct:  149 AELSSKGSLAYGEYTEKTVEIAKSDKEFVIGFIAQHDMG--GREEGFDWIIMTPGVGLDDKGDALGQQYRTVDEVV-KTGTDIIIVGRGLYGQGRDPIEQAKRYQQAGWNAYL 258          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_CANTR3.599e-1746.09Orotidine 5'-phosphate decarboxylase OS=Candida tr... [more]
PYRF_PICAN6.138e-1745.54Orotidine 5'-phosphate decarboxylase OS=Pichia ang... [more]
PYRF_ENDMA6.138e-1745.61Orotidine 5'-phosphate decarboxylase OS=Endomyces ... [more]
PYRF_CANAL6.138e-1745.22Orotidine 5'-phosphate decarboxylase OS=Candida al... [more]
PYR5_DROME6.138e-1743.24Uridine 5'-monophosphate synthase OS=Drosophila me... [more]
PYRF_CANMA8.017e-1739.58Orotidine 5'-phosphate decarboxylase OS=Candida ma... [more]
PYRF_USTMA1.367e-1637.82Orotidine 5'-phosphate decarboxylase OS=Ustilago m... [more]
PYRF_YAMOH1.786e-1645.54Orotidine 5'-phosphate decarboxylase OS=Yamadazyma... [more]
PYRF_PICJA1.786e-1645.30Orotidine 5'-phosphate decarboxylase OS=Pichia jad... [more]
PYRF_CANGY3.979e-1646.02Orotidine 5'-phosphate decarboxylase OS=Candida gl... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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