DR908557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_MOUSE (40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 4.516e-44 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 4.516e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_MACFA (40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 4.516e-44 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 4.516e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_HUMAN (40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 4.516e-44 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 4.516e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_BOVIN (40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 4.516e-44 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 4.516e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_YEAST (40S ribosomal protein S11 OS=Saccharomyces cerevisiae GN=RPS11A PE=1 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 1.000e-43 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F Sbjct: 33 RWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153 HSP 2 Score: 22.3274 bits (46), Expect = 1.000e-43 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 Q+E+AF KQP +F Sbjct: 8 QSERAFQKQPHIF 20
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 2.214e-43 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 461 R++K +GLGFKTP EAI G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+ Sbjct: 30 RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140 HSP 2 Score: 22.3274 bits (46), Expect = 2.214e-43 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 Q+E+AF KQP +F Sbjct: 8 QSERAFQKQPHIF 20
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_ANOGA (40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42 Identity = 82/125 (65.60%), Postives = 98/125 (78.40%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 500 R SIGLGFKTP+EAI GTYIDKKCPFTG +SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV G+KK F+ Sbjct: 30 RMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_DROYA (40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.096e-41 Identity = 82/121 (67.77%), Postives = 95/121 (78.51%), Query Frame = 3 Query: 138 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F Sbjct: 35 RDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_DROPS (40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura GN=RpS11 PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.096e-41 Identity = 82/124 (66.13%), Postives = 96/124 (77.42%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R ++ +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F Sbjct: 32 RRYRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_DROME (40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.096e-41 Identity = 82/121 (67.77%), Postives = 95/121 (78.51%), Query Frame = 3 Query: 138 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 + +GLGFKTPREAI+GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F Sbjct: 35 RDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152 The following BLAST results are available for this feature:
BLAST of DR908557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908557 ID=DR908557; Name=DR908557; organism=Citrus sinensis; type=EST; length=617bpback to top |