DR908552

Overview
NameDR908552
Unique NameDR908552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML1_ORYSI (Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 46/143 (32.17%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   39 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            LSEE      ++   E F  FD D DGSIT  EL  +  S+G   +E ++++M+ + D +++G +  +EFL +  + +        LK AF   + D +  ++ AEL  V+ N+G  L+  +  E+I+  D DGDG +++E+F
Sbjct:    5 LSEE-----QIVEFREAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDADSNGNIEFKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALN_CHICK (Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 3
Query:   84 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + D + +G +   EFL M  + M+       ++ AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V++E+F
Sbjct:    4 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDSNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 131          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 3
Query:   84 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            E F  FD D DG IT  EL  +  S+G   +E ++++M+ + D + +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+F
Sbjct:   15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_COLGL (Calmodulin OS=Colletotrichum gloeosporioides PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   +    E F  FD D DGSIT  EL  +  S+G   +E ++++M+ + D + +G +   EFL +  + M+       LK AF+  + D +  ++ A+   V+ NLG  L+  +  E+I   D DGDG V++E+F
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_EMENI (Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_ASPOR (Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   V    E F  FD D DG IT  EL  +  S+G   SE ++++M+ + D +N+G +   EFL M  + M+       ++ AF+  + D +  ++ AEL  V+ ++G  L+  +  E+I   D DGDG + + +F
Sbjct:    6 TEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEF 142          
The following BLAST results are available for this feature:
BLAST of DR908552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
CML1_ORYSI3.979e-1632.17Calmodulin-like protein 1 OS=Oryza sativa subsp. i... [more]
CALN_CHICK3.979e-1633.59Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV... [more]
CALM_NEUCR3.979e-1631.39Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]
CALM_MEDSA3.979e-1633.59Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_MAGGR3.979e-1631.39Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4[more]
CALM_COLTR3.979e-1631.39Calmodulin OS=Colletotrichum trifolii PE=3 SV=2[more]
CALM_COLGL3.979e-1631.39Calmodulin OS=Colletotrichum gloeosporioides PE=2 ... [more]
CALM_MOUSC5.196e-1632.12Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_EMENI5.196e-1631.39Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=... [more]
CALM_ASPOR5.196e-1631.39Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16680 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-17_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908552 ID=DR908552; Name=DR908552; organism=Citrus sinensis; type=EST; length=618bp
GTAATTGCAGAAGTTGATCCATGGCTGAATCCAGGCCTCTCTCCGAGGAA
ACCGAGACATTGAACCATGTCTTAAGTCTAGTGGAGACTTTCAGAGCCTT
TGATTCGGACAACGATGGGTCGATCACTGGTGCTGAGCTCTCTGGAATAT
TCAATTCAGTTGGTTACAGGGCTAGCGAGGAAGATGTCAGGGAAATGATG
CGGCAAGGTGACACGAACAACGACGGATTGCTGAGCTTGGAGGAGTTCTT
GGAGATGAACACCAAAGACATGGAGCTTGGAAGCCTTGGGAATTTGCTCA
AGGCAGCTTTTGAATCTCTGAATCTTGATGGTGATGATATCTTAACTGGA
GCAGAGCTGCATGAAGTTATTGAAAATTTAGGAGTTGGGTTGTCATTAGC
TGATTGCCAGGAGATTATTGCTTCCATGGATGGAGACGGTGATGGTGCTG
TTAGCTTTGAGGACTTCCAATTAATAGTTAATTCCCTCCTCTAGAATCTC
AACAGTCAACACAACGTATGTAATGCTACATGTTATATATATATATATAT
ATATAGGAATAAACAATCACTAGCGTGTAGATCTATTACCATGCATCCTC
CATTACTCTGCCGGCTCT
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