DR908552

Overview
NameDR908552
Unique NameDR908552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML3_ORYSJ (Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 39/137 (28.47%), Postives = 70/137 (51.09%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + D +  G +  EEFL +  + +      + ++ AF   + D +  +T  EL  V+ NL   LS  +  +++   D DGDG +++ +F
Sbjct:    5 TKEQIAEFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEF 141          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 39/141 (27.66%), Postives = 76/141 (53.90%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQLIV 479
            T   +    E F  FD DN GSI+ +EL+ +  S+G   SE +V ++M + D + +  +   EFL + ++ ++       L  AF+  + +GD +++ AEL  V+ ++G  L+ A+  E++  +  DG G ++ + F  ++
Sbjct:    6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQFAALL 145          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML12_ARATH (Calmodulin-like protein 12 OS=Arabidopsis thaliana GN=CML12 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 3
Query:   84 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTK----------------DMELGSLGNL-LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQLIV 479
            E+FR FD + DGSIT  EL  +  S+G   ++ D+++MM + D + DG +   EFL +  K                D +L     L  + AF   + +GD  +T  EL   + +LG   + A+ Q++I   D DGDG +SF +F  ++
Sbjct:  104 ESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVM 252          

HSP 2 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 44/144 (30.56%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   84 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL------------EMNTKDMELGSLGN----LLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            E+FR FD + DGSIT  EL  +  S+G + ++ D++++M + D + DG +   EFL              +TK      L +      + +F   + +GD  +T  EL  V+ +LG   + AD Q+++  +D DGDG + F +F
Sbjct:   15 ESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGTIDFPEFLCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEF 158          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 38/141 (26.95%), Postives = 77/141 (54.61%), Query Frame = 3
Query:   57 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQLIV 479
            T   +    E F  FD DN+GSI+ +EL+ +  S+G   SE +V ++M + D + +  +   EFL + ++ ++       L  AF+  + +GD +++ AEL  V+ ++G  L+ A+  +++  +  DG G ++ + F  ++
Sbjct:    6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAALL 145          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana GN=CML17 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13
Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   30 SRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDM------ELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            S+ L EE      +  L E FR+FD + DGS+T  EL  +  ++G + S +    ++ + DT ++GL+   EF+ + + ++              L   F   + DG+  +T AEL   +  LG  L++A+   +I   D DGDG ++F++F
Sbjct:    6 SKKLDEE-----QINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQEF 152          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13
Identity = 44/137 (32.12%), Postives = 77/137 (56.20%), Query Frame = 3
Query:   78 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDM-ELGSLGNL----LKAAFESLNLDGDDILTGAELHEVIENLGV--GLSLADCQEIIASMDGDGDGAVSFEDF 467
            L   F+ FD + DG IT  EL+    ++G    ++D+ +M+ + D N DG + ++EF  + +  + E  + G      +K AF   + DGD  +T  EL  V+ +LG+  G +L  C+++I  +D DGDG V++++F
Sbjct:   66 LKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEF 202          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13
Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 3
Query:   42 SEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQLIV 479
            S   E  N  L  V  F   D++ DG I+  EL   F ++G + S+E+    +R  DT+ DG+L  EEF ++   D E       LK AF     +G+D +T   L  +++ LG   +  DC+ +I++ D + DG +SF++F L++
Sbjct:   34 SSNGEDKNRELEAV--FSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKVDDEEEKKME-LKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGVLSFDEFALMM 176          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana GN=CML41 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 3
Query:   78 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTK-----DMELGSLGNLLKAAFESLNLD-GDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQ 470
            L + F  FDSD DG I+  EL   F SVG   S E  +E + + DT+ DG L  E+F+ + T+     D E+   G  LK AFE   ++ G   +T   L +++  LG   +  +C+ +I   D DG+G + F +F+
Sbjct:   65 LRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLYGDGEVDGDGE-LKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNGILDFHEFR 200          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13
Identity = 38/126 (30.16%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   90 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDF 467
            F  FD D DG I+  E   +  ++G   + EDV ++ +  D + DG +   EF++   +   + S    ++ +F + +L+GD  ++  E+  V+  LG   SL DC  ++ ++D DGDG V+ E+F
Sbjct:   55 FSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD--IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEF 178          
BLAST of DR908552 vs. ExPASy Swiss-Prot
Match: CML16_ARATH (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana GN=CML16 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13
Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   51 TETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN--LLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDFQLIV 479
            T+  + +  L + F  FD D DGS+T  EL+ +  S+G +   + +  ++ Q D N +G +  +E +     D+    L N   L   F S + DG+  +T AEL   +  +G  L+  +  E++   D +GDG +SF +F  I+
Sbjct:    4 TKPTDQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRSDQISLLLNQIDRNGNGSVEFDELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVISFNEFSHIM 148          
The following BLAST results are available for this feature:
BLAST of DR908552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
CML3_ORYSJ8.296e-1428.47Calmodulin-like protein 3 OS=Oryza sativa subsp. j... [more]
CALM_KLULA8.296e-1427.66Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV... [more]
CML12_ARATH1.415e-1331.54Calmodulin-like protein 12 OS=Arabidopsis thaliana... [more]
CALM_YEAST1.415e-1326.95Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=... [more]
CML17_ARATH2.414e-1328.95Probable calcium-binding protein CML17 OS=Arabidop... [more]
CML5_ARATH3.152e-1332.12Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML38_ARATH3.152e-1332.19Calcium-binding protein CML38 OS=Arabidopsis thali... [more]
CML41_ARATH5.377e-1334.31Probable calcium-binding protein CML41 OS=Arabidop... [more]
CML1_ARATH5.377e-1330.16Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
CML16_ARATH5.377e-1328.97Probable calcium-binding protein CML16 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16680 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-17_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908552 ID=DR908552; Name=DR908552; organism=Citrus sinensis; type=EST; length=618bp
GTAATTGCAGAAGTTGATCCATGGCTGAATCCAGGCCTCTCTCCGAGGAA
ACCGAGACATTGAACCATGTCTTAAGTCTAGTGGAGACTTTCAGAGCCTT
TGATTCGGACAACGATGGGTCGATCACTGGTGCTGAGCTCTCTGGAATAT
TCAATTCAGTTGGTTACAGGGCTAGCGAGGAAGATGTCAGGGAAATGATG
CGGCAAGGTGACACGAACAACGACGGATTGCTGAGCTTGGAGGAGTTCTT
GGAGATGAACACCAAAGACATGGAGCTTGGAAGCCTTGGGAATTTGCTCA
AGGCAGCTTTTGAATCTCTGAATCTTGATGGTGATGATATCTTAACTGGA
GCAGAGCTGCATGAAGTTATTGAAAATTTAGGAGTTGGGTTGTCATTAGC
TGATTGCCAGGAGATTATTGCTTCCATGGATGGAGACGGTGATGGTGCTG
TTAGCTTTGAGGACTTCCAATTAATAGTTAATTCCCTCCTCTAGAATCTC
AACAGTCAACACAACGTATGTAATGCTACATGTTATATATATATATATAT
ATATAGGAATAAACAATCACTAGCGTGTAGATCTATTACCATGCATCCTC
CATTACTCTGCCGGCTCT
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