DR908547

Overview
NameDR908547
Unique NameDR908547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908547 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 3
Query:   21 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 554
            GR+DG  +        LP   + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+   +++   + + G  GE+R  C + N
Sbjct:  147 GRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFT--CSMIRMGSLVNGASGEVRTNCRVIN 327          
BLAST of DR908547 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 3
Query:    6 IPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIG-IDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 554
            +PL  GRRD   +        LP  N S + +   F   G ++   +VAL G+H++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T   V+  A +   F   F+ A+  +    P TGT+G+IR  C+  N
Sbjct:  135 VPL--GRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of DR908547 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12
Identity = 55/191 (28.80%), Postives = 94/191 (49.21%), Query Frame = 3
Query:    6 IPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK---MAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 554
            +PL  GR DGR S+A  +   LP  +DS++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +CP           V  D G+    D ++ R +  ++ ++  D  L  D  TR  +++   + +    F  EF +++  +S     TG+ GEIR+VC+  N
Sbjct:  150 VPL--GRLDGRISQASDVN--LPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ-----NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
BLAST of DR908547 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12
Identity = 49/182 (26.92%), Postives = 86/182 (47.25%), Query Frame = 3
Query:   12 LKTGRRDG-RKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 554
            +K GRRD    S +      LP    ++  ++  F A G+    +VAL G+H++G+  CV    R+Y   +  L+          CP A         + + R TP   D +Y+  +++++GL+  D  L     T   V   ++S   F+++F  A+  + + +PLTG+ G+IR+ C   N
Sbjct:  147 VKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTNIDLS--FALSRRRSCPAATGSGDNNAAILDLR-TPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
The following BLAST results are available for this feature:
BLAST of DR908547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PERN_ARMRU7.023e-1326.74Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER1_HORVU9.172e-1328.26Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER69_ARATH1.198e-1228.80Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER68_ARATH1.198e-1226.92Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16675 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-53_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908547 ID=DR908547; Name=DR908547; organism=Citrus sinensis; type=EST; length=619bp
CTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCA
GAGATACTTGAGCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGT
TCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTC
TGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCAC
CGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCA
TATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGT
ATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTAT
AGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGC
CACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAAG
ACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAAC
AACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTGC
CAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTACA
ACAAGTTAATAGCTCCAAA
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