DR908523

Overview
NameDR908523
Unique NameDR908523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.517e-76
Identity = 144/205 (70.24%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.517e-76
Identity = 144/205 (70.24%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 4.517e-76
Identity = 144/205 (70.24%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 7.704e-76
Identity = 144/205 (70.24%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  M+PVEK LRDAK+DKS +HD+VLVGGSTRIPKVQ+LLQD FNGKEL KSINPDE           IL G+ +++VQD             ETAGGVM+VLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNV+A +++T ++NKI
Sbjct:  297 ITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 7.704e-76
Identity = 145/205 (70.73%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  ++PVEK LRDAK+DK +VH++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL+G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER   RDNNLLGKFELSGIPP PRGVPQI V FDIDANGILNVSA DK+TG++NKI
Sbjct:  299 ITRARFEELCSDLFRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQNKI 503
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 7.704e-76
Identity = 145/205 (70.73%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 7.704e-76
Identity = 145/205 (70.73%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.006e-75
Identity = 143/205 (69.76%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 282.722 bits (722), Expect = 1.006e-75
Identity = 143/205 (69.76%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKI
Sbjct:  297 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKI 501
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.006e-75
Identity = 145/205 (70.73%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DKS +H++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL G+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K++G++NKI
Sbjct:  298 ITRARFEELCSDLFRGTLEPVEKALRDAKLDKSQIHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSSGKQNKI 502
The following BLAST results are available for this feature:
BLAST of DR908523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71B_BOSMU4.517e-7670.24Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_PIG4.517e-7670.24Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HS71A_BOVIN4.517e-7670.24Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP7D_DROME7.704e-7670.24Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP70_ECHGR7.704e-7670.73Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HS71B_MOUSE7.704e-7670.73Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE7.704e-7670.73Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP71_PONAB1.006e-7569.76Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.006e-7569.76Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_XENLA1.006e-7570.73Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16651 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-23_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908523 ID=DR908523; Name=DR908523; organism=Citrus sinensis; type=EST; length=622bp
CCCCCATCACCCGTGCCAGATTTGAGGAACTTAACATGGATCTGTTCAGA
AAATGCATGGAGCCAGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAA
GAGCTCAGTCCATGATGTTGTTCTTGTCGGAGGATCTACTAGGATTCCCA
AAGTCCAGCAGCTTTTGCAAGATTTCTTTAATGGGAAGGAGCTTTGCAAG
AGCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGCTGTGCAAGCTGC
TATCTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGATCTTCTGCTATTGG
ATGTCACACCTCTCTCCCTTGGTTTGGAGACTGCTGGTGGTGTCATGACT
GTGTTGATTCCAAGGAACACAACCATTCCCACCAAGAAGGAGCAGGTCTT
CTCAACTTACTCTGACAACCAACCTGGTGTGTTGATCCAAGTCTATGAAG
GCGAAAGGACAAGAACCAGGGACAATAACTTGTTGGGTAAATTTGAGCTC
TCTGGTATTCCCCCAGCTCCTAGGGGTGTTCCTCAAATCACTGTGTGCTT
CGACATCGATGCCAATGGTATCCTGAACGTGTCTGCCGAGGACAAGACCA
CTGGTCAAAAGAACAAGATCAC
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