DR908523

Overview
NameDR908523
Unique NameDR908523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 2.478e-74
Identity = 141/205 (68.78%), Postives = 162/205 (79.02%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFRK MEPVE+ LRD+K+DK+SV+++VLVGGSTRIP+VQ+L+ DFFNGKE CKSINPDE           +L+G+ +EK QD             ETAGGVMT LI RNTTIPTKK ++FSTYSDNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRGVPQI V FD+DANGILNVSA +K TG+  KI
Sbjct:  295 ITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKI 499
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.478e-74
Identity = 141/205 (68.78%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.227e-74
Identity = 141/205 (68.78%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HDVVLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE           +L G+  EKV+D             ETAGGVMT LI RN TIPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKI
Sbjct:  299 ITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKI 503
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 7.211e-74
Identity = 142/205 (69.27%), Postives = 160/205 (78.05%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  MEPVEK LRD+K+DKSSV+++VLVGGSTRIP++Q+L+ DFFNGKE CKSINPDE           IL G+ +EK QD             ETAGGVMT LI RNTTIPTKK +VFSTY+DNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRGVPQI V FD+DANGILNVSA +K TG+  KI
Sbjct:  295 ITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKI 499
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 140/205 (68.29%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG++NKI
Sbjct:  300 ITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKI 504
[Close]
BLAST of DR908523 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.230e-73
Identity = 140/205 (68.29%), Postives = 158/205 (77.07%), Query Frame = 3 
Query:    6 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKI 620
            ITRARFEEL  DLFR  ++PVEK +RD K+DKS V ++VLVGGSTRIPK+Q+L+ DFFNGKE  KSINPDE           IL+G+ + K QD             ETAGGVMT LIPRNTTIPTKK ++FSTYSDNQPGVLIQVYEGER +T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+  KI
Sbjct:  297 ITRARFEELCQDLFRSTLDPVEKVMRDGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSQKI 501
The following BLAST results are available for this feature:
BLAST of DR908523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SCHPO2.478e-7468.78Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_CHICK2.478e-7468.78Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP76_SAGOE4.227e-7468.78Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_SCHPO7.211e-7469.27Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP72_RAT9.418e-7468.29Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE9.418e-7468.29Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN9.418e-7468.29Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI9.418e-7468.29Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN9.418e-7468.29Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP71_PICAN1.230e-7368.29Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16651 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-23_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908523 ID=DR908523; Name=DR908523; organism=Citrus sinensis; type=EST; length=622bp
CCCCCATCACCCGTGCCAGATTTGAGGAACTTAACATGGATCTGTTCAGA
AAATGCATGGAGCCAGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAA
GAGCTCAGTCCATGATGTTGTTCTTGTCGGAGGATCTACTAGGATTCCCA
AAGTCCAGCAGCTTTTGCAAGATTTCTTTAATGGGAAGGAGCTTTGCAAG
AGCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGCTGTGCAAGCTGC
TATCTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGATCTTCTGCTATTGG
ATGTCACACCTCTCTCCCTTGGTTTGGAGACTGCTGGTGGTGTCATGACT
GTGTTGATTCCAAGGAACACAACCATTCCCACCAAGAAGGAGCAGGTCTT
CTCAACTTACTCTGACAACCAACCTGGTGTGTTGATCCAAGTCTATGAAG
GCGAAAGGACAAGAACCAGGGACAATAACTTGTTGGGTAAATTTGAGCTC
TCTGGTATTCCCCCAGCTCCTAGGGGTGTTCCTCAAATCACTGTGTGCTT
CGACATCGATGCCAATGGTATCCTGAACGTGTCTGCCGAGGACAAGACCA
CTGGTCAAAAGAACAAGATCAC
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