DR908489

Overview
NameDR908489
Unique NameDR908489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 205.682 bits (522), Expect = 1.630e-52
Identity = 95/160 (59.38%), Postives = 123/160 (76.88%), Query Frame = 1
Query:   88 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            R++MLGLDAAGKTTILYKL +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+  T GLI+VVD  DR+RI +A+ E   II D  M +++IL+FANKQD+  AM P E+ E LGL  +++R W++Q +CA  GDGL +GL WL S  K
Sbjct:   15 RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.128e-52
Identity = 95/160 (59.38%), Postives = 126/160 (78.75%), Query Frame = 1
Query:   88 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            R+++LGLD AGKTTILY+L +GEV+ST+PTIGFNVE VQY N+ F VWD+GGQ  +RP WR YF NT  +IYVVDS D +RIG AK+EF AI+++  +  +V+L+FANKQD+ GA+    V E L L  +K+R+W I  TCA+KG+GL++GLDWL++TLK
Sbjct:   19 RILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 205.297 bits (521), Expect = 2.128e-52
Identity = 95/160 (59.38%), Postives = 126/160 (78.75%), Query Frame = 1
Query:   88 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            R+++LGLD AGKTTILY+L +GEV+ST+PTIGFNVE VQY N+ F VWD+GGQ  +RP WR YF NT  +IYVVDS D +RIG AK+EF AI+++  +  +V+L+FANKQD+ GA+    V E L L  +K+R+W I  TCA+KG+GL++GLDWL++TLK
Sbjct:   19 RILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 8.088e-52
Identity = 97/179 (54.19%), Postives = 129/179 (72.07%), Query Frame = 1
Query:   82 RCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTL--KEMRAAGYSSVGTSSF 612
            + R++M+GLD +GKTTILYKL +GEV++TVPTIGFN+E V+YK + FTVWD+GGQEK+R LWRHYF N  GLI+VVDS D ER+ +A+ E   I+ D  +  + +LVFANKQD + A+   EV   LGL  L  R W IQGT A+ G GLY+GL+WL++T+  K  R+   SS  + S+
Sbjct:   17 KVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPNKPERSTSVSSFRSDSY 195          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.353e-51
Identity = 94/160 (58.75%), Postives = 121/160 (75.62%), Query Frame = 1
Query:   88 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            R++MLGLDAAGKTTILYKL + + + T+PT+GFNVE V YKN+ F VWDVGGQ+K+RPLWRHYF  T GLI+VVDS D  RI +A+QE   II D  M + ++LV ANKQD+ GA++P ++ + L L  LK+R W++Q TCAL GDGL +GL WL+   K
Sbjct:   23 RILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAK 182          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.992e-50
Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   64 SSLATVRCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            S   T   R+++LGLD AGKTTILY+L +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ  +RP WR Y++NTD +IYVVDS DR+RIG +K E  A++++  +  ++++VFANKQDM+ AMTP E+   LGL  LK+RKW I  T A KG GL + ++WL  TLK
Sbjct:   11 SLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.992e-50
Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   64 SSLATVRCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            S   T   R+++LGLD AGKTTILY+L +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ  +RP WR Y++NTD +IYVVDS DR+RIG +K E  A++++  +  ++++VFANKQDM+ AMTP E+   LGL  LK+RKW I  T A KG GL + ++WL  TLK
Sbjct:   11 SLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.992e-50
Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   64 SSLATVRCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            S   T   R+++LGLD AGKTTILY+L +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ  +RP WR Y++NTD +IYVVDS DR+RIG +K E  A++++  +  ++++VFANKQDM+ AMTP E+   LGL  LK+RKW I  T A KG GL + ++WL  TLK
Sbjct:   11 SLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.686e-49
Identity = 93/168 (55.36%), Postives = 124/168 (73.81%), Query Frame = 1
Query:   64 SSLATVRCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLK 567
            S   T   R+++LGLD AGKTTILY+L +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ  +RP WR Y++NTD +IYVVDS DR+RIG +K E  A++++  +  ++++VFANKQDM+ AMT  E+   LGL  LK+RKW I  T A KG GL + ++WL  TLK
Sbjct:   11 SLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178          
BLAST of DR908489 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 193.356 bits (490), Expect = 8.370e-49
Identity = 91/169 (53.85%), Postives = 126/169 (74.56%), Query Frame = 1
Query:   70 LATVRCRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYQGLDWLASTLKEMR 576
            L +   R+++LGLD AGKTTILY+L +GEV++T+PTIGFNVE+V YKN+ F VWD+GGQ  +RP WR Y++NTD +IYVVDS DR+RIG +K E   ++++  +  ++++V ANKQDM G MT  EV   LGL +LKNR + I  T A KG+GL Q +DWL++TL+  +
Sbjct:   12 LGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180          
The following BLAST results are available for this feature:
BLAST of DR908489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARF3_DROME1.630e-5259.38ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF3_ARATH2.128e-5259.38ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARF1_BRARP2.128e-5259.38ADP-ribosylation factor 1 OS=Brassica rapa subsp. ... [more]
ARF4_ARATH8.088e-5254.19Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARF2_SCHPO2.353e-5158.75Probable ADP-ribosylation factor OS=Schizosaccharo... [more]
ARL1_RAT1.992e-5055.95ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE1.992e-5055.95ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARL1_BOVIN1.992e-5055.95ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_HUMAN1.686e-4955.36ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARL1_DROME8.370e-4953.85ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16617 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908489 ID=DR908489; Name=DR908489; organism=Citrus sinensis; type=EST; length=630bp
AGAAATCATCAACAAGCTCAAAGGGACGGGGAATGGGTCAAGCCTTCCGC
AAACTGTTTGATGTCTTCTTTGGCAACAGTGAGATGCCGGGTTGTGATGT
TAGGTCTGGATGCTGCGGGTAAAACAACCATACTGTACAAGCTGCACATT
GGTGAAGTTTTATCTACTGTTCCTACTATTGGTTTTAATGTCGAGAAAGT
TCAGTATAAGAATGTCATATTCACTGTTTGGGATGTTGGCGGACAAGAGA
AATTGAGGCCACTATGGAGGCATTATTTTAATAACACTGATGGACTGATC
TATGTTGTTGACTCCTTGGACCGGGAGAGAATTGGTAAAGCAAAGCAAGA
ATTTCAGGCCATTATCAAAGATCCTTTTATGCTGAACAGTGTCATTTTGG
TGTTTGCCAATAAACAGGACATGAAAGGAGCAATGACCCCAATGGAAGTA
TGTGAAGGATTAGGTCTCTTTGATCTCAAGAACAGGAAATGGCATATTCA
AGGGACTTGTGCACTTAAAGGAGATGGACTTTACCAAGGCTTGGATTGGT
TGGCTTCAACACTTAAGGAGATGAGAGCTGCTGGATACTCTTCAGTGGGC
ACCTCATCATTCTAGGGATCCAGGTTTACA
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