DR908483

Overview
NameDR908483
Unique NameDR908483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: DAPK1_HUMAN (Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=5)

HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 2
Query:   65 AAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGA 577
            AA  G+ +++++LI+  +   ++D  G +    A   GH++ L  L   +  L                        D+ G   LHVAA  GH  V  LL  FG++   QD E   PLH A   G     + L + G N N +++ G TPL TA A GY  I + L   GA
Sbjct:  386 AAGCGNIQILQLLIKRGSRIDVQDKGGSNAVYWAARHGHVDTLKFLSENKCPLDVK---------------------DKSGEMALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGA 535          

HSP 2 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 56/192 (29.17%), Postives = 84/192 (43.75%), Query Frame = 2
Query:   53 ALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVL-----------QRGEA-VLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASFL 592
            ALH AA  G   + ++L    ++P I+D    +    A   G+  V   L           + GE  +LTA+ R          + GA  N CD+ G   LH+A  +    V+  L+  G  V+ QD  G+ PLH+A + G+   V  L +   N +  +K G TPL+ A   G   + + L   GAS   L
Sbjct:  448 ALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVACKDGNMPIVVALCEANCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGASVEAL 639          

HSP 3 Score: 69.3218 bits (168), Expect = 1.823e-11
Identity = 48/170 (28.24%), Postives = 75/170 (44.12%), Query Frame = 2
Query:   53 ALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVL------------QRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTA 526
            A++ AA +G    ++ L E +    +KD  G     VA   GH +V  +L            +    +  AA            + G + N  ++ G TPL  A+ +G+  +V  L E GAD+   D +GH  LHLAV     E ++ LL  G   + + + G TPL+ A
Sbjct:  415 AVYWAARHGHVDTLKFLSENKCPLDVKDKSGEMALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVA 584          

HSP 4 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 50/183 (27.32%), Postives = 81/183 (44.26%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAA------------RRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLL 562
            T LH AA +G   + + L E   +  IK+  G +    A  +G+ +++  L    A L A             RR           +G   +Y D++G TPLHVA   G+  +V+ L E   +++  +  G  PLHLA   G  + V  L   GA+  A +  G T    A++  ++ ++ LL
Sbjct:  480 TPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVACKDGNMPIVVALCEANCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGASVEALTTDGKTAEDLARSEQHEHVAGLL 662          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: CTTB2_SHEEP (Cortactin-binding protein 2 OS=Ovis aries GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14
Identity = 55/179 (30.73%), Postives = 85/179 (47.49%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEA-DPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASA 583
            T L  AAA G+  ++ ML+  E  D     + G S    A   GH + + +L   EA + AA                     D+ G TPL  AA +GH   V LLI + A++    + G  PL+LA + G+ E +++LL+ G + + +++ G TP++ A   G     +LLM  GA A
Sbjct:  705 TLLQQAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQVNAA---------------------DKNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTDRSVKTRDGWTPIHAAVDTGNVDSLKLLMYHGAPA 862          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: Y1861_PYRAE (Putative ankyrin repeat protein PAE1861 OS=Pyrobaculum aerophilum GN=PAE1861 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 53/164 (32.32%), Postives = 79/164 (48.17%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVLQRG-----EAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTA 526
            T L+ AA  GD   V++LI+  ADP  +D  G++   +A       V+ +L        EA+ TAAR            +G        +G + LH+ A  G   +V LL+E+G D   +D  G  PLH+A E    + VE+LL  G + N +  +G TPL+ A
Sbjct:   37 TPLYYAAERGDVGTVDLLIKAGADPNARDREGKTPIIIATQSRKFGVIPLLSASAVGVEEALYTAARNGCHKAVRYMLARGVRPGA--SHGESLLHLVA--GDAGLVKLLLEYGVDPNARDAHGKTPLHMASEHNCAQCVELLLKRGPDVNVKDGAGRTPLHYA 196          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: KDIS_HUMAN (Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 61/196 (31.12%), Postives = 91/196 (46.43%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEA------------VLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASFLNLP 601
            TAL +A+  G   +VE L++   +   +D  G +    A  KG  +V+ +L    A            ++ AA R            GA  N  D+YG TPL  AA KGH   V  L+  GADV+ +       L +AV+GG T++V+ +L    N N   K G T L  A   G+  I Q L++ G   +++N+P
Sbjct:   73 TALISASKEGHVHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGAKVNCSDKYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPNVNLTDKDGNTALMIASKEGHTEIVQDLLDAG---TYVNIP 265          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: LATA_LATTR (Alpha-latrotoxin-Lt1a OS=Latrodectus tredecimguttatus PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 35/88 (39.77%), Postives = 57/88 (64.77%), Query Frame = 2
Query:  305 GLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMN 568
            G+TPLH+A I+G K ++ L+ + G ++E + +E + PLHLA      E +++LLD G+N  A++ SGATPL+ A   G    + +L+N
Sbjct:  730 GITPLHLAVIQGRKQILSLMFDIGVNIEQKTDEKYTPLHLAAMSKYPELIQILLDQGSNFEAKTNSGATPLHLATFKGKSQAALILLN 817          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: FANK1_MOUSE (Fibronectin type 3 and ankyrin repeat domains 1 protein OS=Mus musculus GN=Fank1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 57/184 (30.98%), Postives = 89/184 (48.37%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDN-EGHAPL-HLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASFLN 595
            TAL  AA  G  R+V++L+    D  +K+  G+    +A   GH++V+  L+R                      GAS    D  G T LH AA  GH  V+  +I+ G +V+  D   G  PL  ++   GS +   +L++ GA+ N + K G TPL  A    ++ + QLL+++GA A+  N
Sbjct:  146 TALMVAAQKGYTRLVKILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRR---------------------HGASWEARDLGGCTALHWAADGGHCSVIDWMIKDGCEVDVVDTGSGWTPLMRVSAVTGSQKVASLLIEAGADVNIKDKDGKTPLMVAVLNNHEQLVQLLLDKGADATVKN 308          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: CTTB2_EULMM (Cortactin-binding protein 2 OS=Eulemur macaco macaco GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEA-DPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASA 583
            T L  AAA G+  ++ ML+  E  D     + G S    A   GH + + +L   EA + AA                     D+ G TPL  AA +GH   V LLI + A +    + G  PL+LA + G+ E +++LL+ G + + +++ G TP++ A   G     +LLM  GA A
Sbjct:  703 TLLQQAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQVNAA---------------------DKNGFTPLCAAAAQGHFECVELLIAYDAHINHAADGGQTPLYLACKNGNKECIKLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLLMYHGAPA 860          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: PSD10_MOUSE (26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus GN=Psmd10 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVL-AVLQRGEAVLT-----------AARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQ 529
            TALH A + G   +VE L+++      KDD G S   +A   G  E++ A+L +G  V             AA +          + GA+ +  D Y  T +H AA KG+  +V +L+ + A    QD EG+ PLHLA +    E  + L+  GA+    +K   TPL  A+
Sbjct:   42 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213          

HSP 2 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  269 DKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGAS 580
            DK  +T   DQ   T LH A   GH  +V  L++ G  V  +D+ G +PLH+A   G  E V+ LL  GA+ NA +++G TPL+ A +     I+ +L+  GA+
Sbjct:   29 DKSLATR-TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN 131          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: PSD10_RAT (26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus GN=Psmd10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 54/172 (31.40%), Postives = 82/172 (47.67%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEADPTIKDDRGRSCFDVARDKGHIEVL-----------AVLQRG-EAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQ 529
            TALH A + G   +VE L+++      KDD G S   +A   G  E++           AV Q G  A+  AA +          + GA+ +  + Y  T +H AA KG+  +V +L+ + A    QD EG+ PLHLA +    E  ++L+  GA+    +K   TPL  A+
Sbjct:   42 TALHWACSAGHTEIVEFLLQLGVPVNEKDDAGWSPLHIAASAGRDEIVKALLIKGAQVNAVNQNGCTALHYAASKNRHEIAVMLLEGGANPDAKNHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKLLVTQGASIYIENKEEKTPLQVAK 213          
BLAST of DR908483 vs. ExPASy Swiss-Prot
Match: CTTB2_FELCA (Cortactin-binding protein 2 OS=Felis catus GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 54/179 (30.17%), Postives = 82/179 (45.81%), Query Frame = 2
Query:   50 TALHNAAANGDRRMVEMLIEMEA-DPTIKDDRGRSCFDVARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXXDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASA 583
            T L  AA  G+  ++ ML+  E  D     + G S    A   GH + + +L                      + GA  N  D  G TPL  AA +GH   V LLI + A++    +EG  PL+LA + GS E +++LL+ G + + +++ G TP++ A   G     +LLM   A A
Sbjct:  709 TLLQQAATQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLL---------------------LNAGAQVNAADTNGFTPLCAAAAQGHFKCVELLISYDANINHAADEGQTPLYLACKNGSKECIQLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLLMYHRAPA 866          
The following BLAST results are available for this feature:
BLAST of DR908483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
DAPK1_HUMAN3.005e-1430.41Death-associated protein kinase 1 OS=Homo sapiens ... [more]
CTTB2_SHEEP3.005e-1430.73Cortactin-binding protein 2 OS=Ovis aries GN=CTTNB... [more]
Y1861_PYRAE3.924e-1432.32Putative ankyrin repeat protein PAE1861 OS=Pyrobac... [more]
KDIS_HUMAN3.924e-1431.12Kinase D-interacting substrate of 220 kDa OS=Homo ... [more]
LATA_LATTR5.125e-1439.77Alpha-latrotoxin-Lt1a OS=Latrodectus tredecimgutta... [more]
FANK1_MOUSE5.125e-1430.98Fibronectin type 3 and ankyrin repeat domains 1 pr... [more]
CTTB2_EULMM5.125e-1430.73Cortactin-binding protein 2 OS=Eulemur macaco maca... [more]
PSD10_MOUSE6.694e-1431.4026S proteasome non-ATPase regulatory subunit 10 OS... [more]
PSD10_RAT8.742e-1431.4026S proteasome non-ATPase regulatory subunit 10 OS... [more]
CTTB2_FELCA8.742e-1430.17Cortactin-binding protein 2 OS=Felis catus GN=CTTN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16611 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-45_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908483 ID=DR908483; Name=DR908483; organism=Citrus sinensis; type=EST; length=631bp
CTTGTTGGAATCTGGTGCGGATAAGGAAGCTAAGGGTAAAGATGGGAAAA
CGGCATTGCATAATGCAGCAGCTAACGGTGACCGTAGGATGGTGGAGATG
TTGATCGAGATGGAAGCCGATCCTACCATCAAGGATGATCGTGGCCGTTC
GTGCTTTGACGTTGCTCGCGACAAGGGACATATTGAAGTCTTGGCGGTTT
TACAGCGCGGAGAAGCGGTGCTGACGGCAGCAAGACGAGGAGAATTGGAG
GGTCTCGAGTCGCTGCTTGATAAAGGTGCCAGCACGAACTACTGTGATCA
GTACGGCCTGACGCCCCTCCACGTAGCAGCAATCAAAGGGCACAAGCATG
TAGTGTTGCTTTTAATCGAATTCGGAGCCGACGTGGAATGTCAGGACAAC
GAAGGCCACGCGCCGCTGCATTTGGCCGTGGAGGGCGGCAGTACAGAGAC
GGTGGAGGTGTTGCTCGACAACGGAGCCAATGCTAATGCCAGAAGCAAGA
GTGGAGCCACTCCTCTTTATACGGCTCAAGCTATGGGGTACGATGGTATC
TCACAGTTGCTAATGAACAGGGGAGCCTCCGCTTCCTTCCTCAATCTTCC
ATGCTAGCTTCTGTATTAGAAGACTGATTAT
back to top