DR908466

Overview
NameDR908466
Unique NameDR908466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 63/156 (40.38%), Postives = 105/156 (67.31%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TK++KISR+ ++ +G + + E+ ILT+++K GWK+GT+ITF  +G+   N  PAD+VFI+ +K H  F RDG+++I T  I+L EAL G  + + TLDGR++ + +++++ P     +   G+P    P +RG+L
Sbjct:  155 KQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDL 310          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31
Identity = 79/183 (43.17%), Postives = 112/183 (61.20%), Query Frame = 2
Query:    5 SSNETF---GDDDVFHSFNRVFVMGGPKKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI-PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            ++NE F   G DD+F +FN        ++ PPIE+ L  +LEE+ KG  KK+KISR     NG   K E++L + VKPGWK GT+ITF ++G+   N  PAD+VFI+ +KPHS+F R+G DL  T  I+L +AL G  V + TL G  + + P   +I P     +   G+P+  EPS+RG+L
Sbjct:  128 NTNEIFWNIGGDDMF-AFNAQAPSRKRQQDPPIEHDLFVSLEEVDKGCIKKMKISRMATGSNG-PYKEEKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPNHEIIKPTTTRRINGLGLPVPKEPSRRGDL 308          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30
Identity = 63/156 (40.38%), Postives = 104/156 (66.67%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PPI + L  +LEE+Y G TK++KISR+ ++ +G + + E+ ILT+++K GWK+GT+ITF  +G+   N  PAD+VF++ +K H  F RDG++++ T  I+L EAL G  + + T+DGR+L + + +++ P     V   G+P    P +RG+L
Sbjct:  155 KQDPPIIHELKVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDIVKPGMRRRVIGYGLPFPKNPDQRGDL 310          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30
Identity = 61/156 (39.10%), Postives = 104/156 (66.67%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TK++KISR+ ++ +G + + E+ ILT+++K GWK+GT+ITF  +G+      PAD+VF++ +K H  F RDG+++I T  I+L EAL G  + + T+DGR++ + I++++ P     +   G+P    P +RG+L
Sbjct:  155 KQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDL 310          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.811e-22
Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 2
Query:   92 IENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQ-QNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            ++  LP +LE+L+ G  K  KI R+    +G + K +  + + +KPGWK GT+IT++ +G+   Q  +   + F++ EK H  F RDG+DLI T  ++  E+L G+   + T+DGR+L +     + P+   T P +GMP    PS+RGNL
Sbjct:  182 VQVNLPVSLEDLFVGKKKSFKIGRK--GPHGASEKTQ--IDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNL 328          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16
Identity = 51/119 (42.86%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            IK  +IL V V  G K G RITF  + +    V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LDGR + +  P   VI P     V  EGMP    P ++G+L
Sbjct:  211 IKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDL 329          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16
Identity = 51/119 (42.86%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            IK  +IL V V  G K G RITF  + +    V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LDGR + +  P   VI P     V  EGMP    P ++G+L
Sbjct:  211 IKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDL 329          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16
Identity = 51/119 (42.86%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            IK  +IL V V  G K G RITF  + +    V+P D+V  V EK H VF RDGNDL +T  I L EAL G+      LD R + +  P   VI P     V  EGMP    P ++G+L
Sbjct:  211 IKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDL 329          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16
Identity = 50/119 (42.02%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            IK  +IL V V  G K G RITF  + +    V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LD R + +  P   VI P     V  EGMP    P ++G+L
Sbjct:  211 IKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDL 329          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  181 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 320          
The following BLAST results are available for this feature:
BLAST of DR908466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DNJB4_HUMAN3.569e-3140.38DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNAJ1_DROME4.661e-3143.17DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB4_MOUSE1.356e-3040.38DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN3.021e-3039.10DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
SIS1_YEAST8.811e-2236.42Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJA2_HUMAN1.901e-1642.86DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.901e-1642.86DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_RAT7.224e-1642.86DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE9.435e-1642.02DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA1_RAT2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16594 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908466 ID=DR908466; Name=DR908466; organism=Citrus sinensis; type=EST; length=634bp
CAGTTCCTCAAATGAGACATTTGGTGATGATGATGTTTTTCATTCCTTTA
ATAGAGTATTTGTAATGGGTGGACCTAAGAAAGCACCTCCGATTGAGAAT
AGGCTGCCTTGTACCCTTGAGGAACTCTACAAGGGGACTACTAAGAAGAT
AAAGATCTCTAGGGAAATTGTTGACATCAATGGTAATACCATCAAGGTGG
AAGAAATTCTAACTGTTGATGTGAAGCCTGGATGGAAGAAGGGTACAAGG
ATCACCTTCGAAGAGAAGGGAAATGTGCAGCAAAATGTTAAGCCTGCAGA
CGTCGTCTTCATCGTGGACGAGAAGCCTCACAGTGTGTTTACTCGAGATG
GGAATGATTTGATCGTCACACGGACGATAACTCTCGGTGAGGCCTTGGAA
GGTTATCCGGTTCGTCTCACTACCCTGGATGGAAGGAGTTTAAACATCCC
AATCGACAATGTGATTCATCCCAACTATGAGGAGACTGTCCCGAGAGAGG
GGATGCCAATTCAGAACGAGCCATCAAAGAGAGGCAACTTGAAATCAAGT
TCAACATCAAGTTCCCACCAAGTTTGACTGCAGAGCAAAAGGCCGGGATC
AAGTTTTTACAGCTTTTAATCGATGCTTACCTTG
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