DR908466

Overview
NameDR908466
Unique NameDR908466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.831e-14
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIP--IDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KGT + I          G  +  E+ +L V V+ G + G +ITF  + +   +    D+VF++ +K H  F R G DL    T++L EAL G+   LT LDGR L I   +  V+ P+  + +  EGMPI   P  +G +
Sbjct:  195 KGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKM 334          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.506e-13
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPI--DNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KGT + I          G  +  E+ +L V+V+ G +   +ITF  + +   +    D+VF++ +K H  F R G DL V  TI+L EAL G+   LT LD R L I      V+ P+  + +  EGMPI   P  +G L
Sbjct:  196 KGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKL 335          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.570e-13
Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  179 NGNTIKVE-EILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPI--DNVIHPNYEETVPREGMPI 511
            NG  ++ E +IL V V+PG K G RI F+ + +   +V P DVVFIV E+PH  F RDG+DL+    I L  A+ G    L  + G  L + I    VI P   + +  +GMPI
Sbjct:  205 NGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 318          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.476e-13
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPI--DNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KGT + I          G  +  E+ +L V V+ G +   +ITF  + +   +    D+VF++ +K H  F R G+DL V  T++L E+L G+   LT LDGR L I      V+ P+  + +  EGMP+   P  +G L
Sbjct:  193 KGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKL 332          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPI--DNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            I   +ILTV V+ G   G +I F+E+G     + P DV+F++D+K H  F R G+ L     + L  AL G  + +  LD R L IPI     I PN  + +P +GM +     + GNL
Sbjct:  204 ISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNL 321          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  188 TIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGY-PVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            T+  + +L+  V    K+  +I      +    + P DV+  + +KPH VF R G+DL     I+L EAL G+  V LTTLDGR L    PI  ++HP     +P EGM   ++   RG+L
Sbjct:  215 TVPEQRMLSFFVNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDL 335          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  197 VEEILTVDVKPGWKKGTRITFEEKGNV-QQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            V+E + V + PG + G+++  E KG+  +    P D+  IV  KPH +F R G+DL V   IT  EA+ G  V + TLDG  + + I           VP +GMP + + S RG+L
Sbjct:  218 VKETIKVKIPPGVRDGSKLVVEGKGHAGRYGGPPGDLYIIVKVKPHKIFERKGDDLYVDVNITYPEAVLGTEVEVPTLDGEKVKVKIPPGTKEGELIKVPGKGMP-RLKGSGRGDL 332          
The following BLAST results are available for this feature:
BLAST of DR908466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DNJH_ATRNU8.831e-1433.57DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.506e-1334.29Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
MAS5_YEAST2.570e-1340.35Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNJH_CUCSA7.476e-1332.86DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
MAS5_SCHPO4.846e-1236.13Mitochondrial protein import protein mas5 OS=Schiz... [more]
XDJ1_SCHPO6.997e-1135.54DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DNAJ2_AQUAE9.139e-1136.21Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16594 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908466 ID=DR908466; Name=DR908466; organism=Citrus sinensis; type=EST; length=634bp
CAGTTCCTCAAATGAGACATTTGGTGATGATGATGTTTTTCATTCCTTTA
ATAGAGTATTTGTAATGGGTGGACCTAAGAAAGCACCTCCGATTGAGAAT
AGGCTGCCTTGTACCCTTGAGGAACTCTACAAGGGGACTACTAAGAAGAT
AAAGATCTCTAGGGAAATTGTTGACATCAATGGTAATACCATCAAGGTGG
AAGAAATTCTAACTGTTGATGTGAAGCCTGGATGGAAGAAGGGTACAAGG
ATCACCTTCGAAGAGAAGGGAAATGTGCAGCAAAATGTTAAGCCTGCAGA
CGTCGTCTTCATCGTGGACGAGAAGCCTCACAGTGTGTTTACTCGAGATG
GGAATGATTTGATCGTCACACGGACGATAACTCTCGGTGAGGCCTTGGAA
GGTTATCCGGTTCGTCTCACTACCCTGGATGGAAGGAGTTTAAACATCCC
AATCGACAATGTGATTCATCCCAACTATGAGGAGACTGTCCCGAGAGAGG
GGATGCCAATTCAGAACGAGCCATCAAAGAGAGGCAACTTGAAATCAAGT
TCAACATCAAGTTCCCACCAAGTTTGACTGCAGAGCAAAAGGCCGGGATC
AAGTTTTTACAGCTTTTAATCGATGCTTACCTTG
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