DR908458

Overview
NameDR908458
Unique NameDR908458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.713e-39
Identity = 74/119 (62.18%), Postives = 96/119 (80.67%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK KI D  ++ I WLD NQ AE DE+E + K+LE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.921e-39
Identity = 72/118 (61.02%), Postives = 97/118 (82.20%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TTG+ N+ITITNDKGRLSK+EIE+MV EAEKYKAEDEE   ++ ++NALE+YAYN+RN++ DEK+  K D ADKKK+EDA++  I WLD++Q A  +E+E+  KELE++ NPI+ K+Y
Sbjct:  492 TTGKSNRITITNDKGRLSKEEIERMVNEAEKYKAEDEEATARITSRNALESYAYNLRNSLTDEKLADKFDAADKKKLEDAVNSTISWLDNSQEASKEEYEEHQKELEAVANPIMQKLY 609          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 2.921e-39
Identity = 74/119 (62.18%), Postives = 98/119 (82.35%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D   + + WL++NQLAE +EF+ K KELE++CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQ 614          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.921e-39
Identity = 74/119 (62.18%), Postives = 98/119 (82.35%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG+ NKITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  ADKKKI +  ++A+ WL++NQLAE DEF+ K +ELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQ 614          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.815e-39
Identity = 72/119 (60.50%), Postives = 96/119 (80.67%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKA+DE  + KV+AKN+LE+Y YNM+ TV+DEK+  K+   DKK I    ++ ++W+D NQ AE D++E K KELE +CNPII K+YQ
Sbjct:  501 STGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQ 619          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.983e-39
Identity = 74/119 (62.18%), Postives = 97/119 (81.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG+ NKITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D  ++ + WL++NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.110e-38
Identity = 72/119 (60.50%), Postives = 98/119 (82.35%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +T ++NKITITNDKGRLSK+EIE+MV EAEKY+ EDE+ K+ ++AKNALE+Y +NM++T++DEK+  K+  +DK+ I D  +  I+WLDSNQLA+ +E+E K KELE ICNPII K+YQ
Sbjct:  494 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQ 612          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.450e-38
Identity = 70/119 (58.82%), Postives = 97/119 (81.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG K KITITNDKGRLSK+EIEKMV +AEK+K +DE+ K +VE+KN LENYA+ ++N++KDEK+ +K+  +DK  IE   +  ++WL+SNQ AE DE+EDKMK LE++ NPI++K+YQ
Sbjct:  492 STGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQ 610          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.893e-38
Identity = 73/119 (61.34%), Postives = 96/119 (80.67%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG+ NKITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI    ++ + WL++NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQ 614          
BLAST of DR908458 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.473e-38
Identity = 74/119 (62.18%), Postives = 96/119 (80.67%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLDSN LAE +EF  K +ELE +CNPII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNTLAEKEEFVHKREELERVCNPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of DR908458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
HSP7C_ICTPU1.713e-3962.18Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP71_PUCGR2.921e-3961.02Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HS71L_RAT2.921e-3962.18Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_PIG2.921e-3962.18Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP70_HYDMA3.815e-3960.50Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HS71L_MACFA4.983e-3962.18Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP7D_MANSE1.110e-3860.50Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HS7C1_DICDI1.450e-3858.82Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS71L_BOVIN1.893e-3861.34Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP71_RAT2.473e-3862.18Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16586 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-24_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908458 ID=DR908458; Name=DR908458; organism=Citrus sinensis; type=EST; length=412bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGA
AGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGA
TGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGATGATGCT
CCTCCAGCTGGT
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