DR908384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908384 vs. ExPASy Swiss-Prot
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 40/135 (29.63%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 3 TALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKG-CPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCD 404 T+L+D Y K G +++A++IF++M+ + + +TY +ISGL + E A++ F G+ + + Y S+++ +G V E +F EM+++G + Y L+D L + G L+EAL + + E D Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKME----KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
BLAST of DR908384 vs. ExPASy Swiss-Prot
Match: PP126_ARATH (Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana GN=At1g76280 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 56/214 (26.17%), Postives = 91/214 (42.52%), Query Frame = 3 Query: 9 LIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCK-NERLEEA--MQYFEFCRA----------NGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYC----YNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGQVTRACKILDELA 599 L+ +Y L A+ + RMK + PD TY ++ S N EE + + C+ NG + + +++ LG G V+E ++ + Y YN+++ +L + + D + +FKRM+ GC V TY I+I+ H + A L MMI G +P A +F AL L A +LD+ A Sbjct: 409 LLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAA 622
BLAST of DR908384 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 46/191 (24.08%), Postives = 91/191 (47.64%), Query Frame = 3 Query: 3 TALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITP----------TAASFRALSIG 545 T+L+ Y+ G +N+A +F+ + V VT+ + SG + R EA+ F+ GV ++ F ++ G +D E + + M E ++S+ L++ AKCGK+++A ++F D ++ + T++ +I G +E ++L+ M+ + + P + AS AL +G Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSV----VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF----DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
BLAST of DR908384 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 45/190 (23.68%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 6 ALIDSYAKLGSMNEAINI----------------FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 527 +LID Y+K G + EA I E+M + ++ V++ IISG E+ E+A F G+ + Y++++D +++ ++++K D Y + L+D +KCG L ++ +F ++ + T+ +I G + EEA++L++ MI + I P +F Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF----EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707 The following BLAST results are available for this feature:
BLAST of DR908384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 254
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908384 ID=DR908384; Name=DR908384; organism=Citrus sinensis; type=EST; length=651bpback to top |