DR908378

Overview
NameDR908378
Unique NameDR908378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP21A_CANFA (Steroid 21-hydroxylase OS=Canis familiaris GN=CYP21 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11
Identity = 51/183 (27.87%), Postives = 82/183 (44.81%), Query Frame = 1
Query:   16 ESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKK--HGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRF-APGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNF 555
            E  V   ++     G  T++ T +W  A+LL + E    +QEE    +     G R+ +     + +L   + E LRL P + + L       T +      YDIP+G +V  +   A+    +++ P  + PDRF  PG            ++FG G   CLGEP A L++  + + LLR F
Sbjct:  276 EGHVHMSVVDLFIGGTETTATTLSWAVAFLLHHPEIQQRLQEELDRELGPGASGSRIPYRDPTRLPLLSATVAEVLRLRPVVPLALPHC----TTRPSSISGYDIPEGMVVIPNLQGAHLDETVWERPQEFRPDRFLVPGASP-------RVLAFGCGARVCLGEPLARLELLVVLAQLLRAF 447          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11
Identity = 51/185 (27.57%), Postives = 83/185 (44.86%), Query Frame = 1
Query:   13 TESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAG--AFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEF 561
            T  E+  L    L  G  T++    W    L++     S + EE K  + ++  ++D   + +M  L   +KE LR HPP  M L  +      +  +   YDIP G  V       +  P+++  P+ +DPDRF  G+E+    G      I FG GR  C G   A + +  + + L++ FE+
Sbjct:  301 TYPELVTLCSEFLNGGTDTTATAIEWAIGRLIENPNIQSQLYEEIKKTVGEN--KIDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHA----VTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEW 479          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP6A8_DROME (Cytochrome P450 6a8 OS=Drosophila melanogaster GN=Cyp6a8 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11
Identity = 50/193 (25.91%), Postives = 85/193 (44.04%), Query Frame = 1
Query:    4 RPTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFP 582
            R  T  EV         AG  TSS T  +    L K  +    V+ E + ++++H +   ++   ++  L + + E LRL+  +  L R +   + V       + I  G  V    +  +  P IY  P  + P+RF+P  EE     + +++ FG G   C+G  F  +Q +   + L+RNF+F   S  P
Sbjct:  293 RGLTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQNFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPN--FVIEAGQSVIIPSSAIHHDPSIYPEPFEFRPERFSP--EESAGRPSVAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSKTP 481          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11
Identity = 53/184 (28.80%), Postives = 88/184 (47.83%), Query Frame = 1
Query:   49 LFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHL----MKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEL 588
            LF G  T++ T+T    +L    E +  V+EE +      M   GK +  ++L ++      IKE LR++PP+    R +     ++T E   Y IPKG  V  S    + +  ++ N + + P+RF     ED     F+YI FGGG   C+G+ FA + +K     L ++  + L +  P +
Sbjct:  294 LFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLDQLKYTGCVIKETLRINPPVPGGFRVA-----LKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKEEFQPERFMSKGLED--GSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGPPTM 470          
The following BLAST results are available for this feature:
BLAST of DR908378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
CP21A_CANFA7.422e-1127.87Steroid 21-hydroxylase OS=Canis familiaris GN=CYP2... [more]
C77A2_SOLME7.422e-1127.57Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
CP6A8_DROME9.693e-1125.91Cytochrome P450 6a8 OS=Drosophila melanogaster GN=... [more]
CP26A_DANRE9.693e-1128.80Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16506 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-12_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908378 ID=DR908378; Name=DR908378; organism=Citrus sinensis; type=EST; length=653bp
GGCCGGCCCACAACTGAGTCTGAGGTCACTGGTTTACTCATTGCCGCTCT
TTTTGCTGGGCAGCACACCAGCTCAATCACCTCCACTTGGACTGGGGCCT
ATCTCCTCAAATACAAGGAGTATCTATCTGCTGTGCAGGAGGAACAAAAA
CACCTGATGAAAAAACACGGGAAAAGGGTTGATCATGATATCTTAGCTGA
GATGGATGTCCTCTATCGATGCATTAAGGAAGCCCTGAGACTACACCCTC
CACTGATCATGCTTTTGCGAAGCTCACACAGTGATTTTACTGTGCAGACC
CGTGAAGGTAAAGAATACGACATACCAAAGGGACACATAGTTGGAACATC
ACCAGCATTTGCAAACCGGCTTCCTCATATTTACAAGAATCCAGACAGTT
ACGATCCTGATAGGTTTGCTCCTGGAAGAGAAGAAGATAAGGCCGCTGGG
GCTTTCTCATATATTTCGTTTGGTGGGGGTAGGCATGGATGTCTTGGTGA
GCCTTTTGCATATCTGCAGATAAAGGCAATATGGAGCCATTTGTTAAGAA
ATTTTGAATTTGAGCTGATATCTCCTTTCCCTGAATTGATTGGAATGCAA
TGGTTGTTGGTGTCAAAGGAAAGGTGATGGTGCGTTACAAGCGCAAGGAA
CTT
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