DR908378

Overview
NameDR908378
Unique NameDR908378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16
Identity = 61/184 (33.15%), Postives = 96/184 (52.17%), Query Frame = 1
Query:   49 LFAGQHTSSITSTWTGAYLLKYKEYLSAVQEE--QKHLMKKHGK--RVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEL 588
            LF G  T++  +T    YL  Y   L  V+EE   K L+ K  +  ++D +IL ++  +   IKE LRL+PP+    R +     ++T E   Y IPKG  V  S    + +  I+ N + ++PDRF     ED  A  FS+I FGGG   C+G+ FA + +K     L R+ +++L++  P +
Sbjct:  298 LFGGHETTASAATSLITYLGLYPHVLQKVREELKSKGLLCKSNQDNKLDMEILEQLKYIGCVIKETLRLNPPVPGGFRVA-----LKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPED--ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTM 474          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16
Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 1
Query:   22 EVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIV---GTS---PAFA-NRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEF 561
            ++    +    AG  TSS T ++    L    +    ++ E   ++K++ +++ +D + EM  L + + E LR +P L  LLR          R  KEY IP  +++   G+    P  + +  P +Y +P+ +DP RF P  EE KA   F+Y+ FG G   C+GE F  LQ+K    +LLR+F+F
Sbjct:  284 QIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLR----------RSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEP--EEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKF 458          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 1
Query:    1 GRPTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREE---DKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPF-PELIGMQ 600
            G   T++E+  LL+    AG  TS+ T  W  A L+++ + +   QEE   ++ +  + V+   +A++  L   IKE  RLHPP  + L    S+    + E   Y IPKG  + T+     R P  + +P ++ P+RF PG E+   D     F  I FG GR  C G       I+ + + L++ F++EL     PE + M+
Sbjct:  284 GGSLTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRD-RPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASE----SCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNME 482          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 1
Query:   13 TESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFEL 567
            +E E+T +++    AG  T+S +  W    LL++ + ++ V+ E   ++  + K  + DI   +  +   +KE LRLHPPL +L+        +Q  +   YDIPKG  V  +     R P  + NP  + P+RF   + + K    +  I FG GR  C+G P  +  +   +  LL  F++EL
Sbjct:  257 SEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDI-DSLPYMQAVLKEQLRLHPPLPLLIPRK----AIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQN-YELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWEL 435          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP6B5_PAPGL (Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus GN=CYP6B5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   13 TESEVTGLLIAA-----LFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFE 564
            T  E+T  +IAA       AG  TS+ T ++    L +  +    V  E    +K+H   + +D L+EM  L +   E LR +P   +LLR++ +D+ V    G    + KG  V  S    +  P  Y +P+ +DP+RF+P  E  +     +YI FG G+  CLG  F   Q++     LL  F FE
Sbjct:  284 TTLELTDSVIAAQTFIFYAAGYETSASTMSFLLFELAENPDIQEKVIAEVDETLKRHNGEITYDTLSEMTYLTQVFHETLRKYPVADILLRNAKADYAV---PGTNVTLKKGQTVVVSGFGIHYDPKYYPDPEKFDPERFSP--ENVRNRHPCAYIPFGAGQRKCLGMRFGQWQVQVCIIKLLSKFRFE 467          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP6B4_PAPGL (Cytochrome P450 6B4 OS=Papilio glaucus GN=CYP6B4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   13 TESEVTGLLIAA-----LFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFE 564
            T  E+T  +IAA       AG  TS+ T ++    L +  +    V  E    +K+H   + +D L+EM  L +   E LR +P   +LLR++ +D+ V    G    + KG  V  S    +  P  Y +P+ +DP+RF+P  E  +     +YI FG G+  CLG  F   Q++     LL  F FE
Sbjct:  284 TTLELTDSVIAAQTFIFYAAGYETSASTMSFLLFELAENPDIQEKVIAEVDETLKRHNGEITYDTLSEMTYLTQVFHETLRKYPVADILLRNAKADYAV---PGTNVTLKKGQTVVVSGFGIHYDPKYYPDPEKFDPERFSP--ENVRNRHPCAYIPFGAGQRKCLGMRFGQWQVQVCIIKLLSKFRFE 467          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15
Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 1
Query:    4 RPTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKR-VDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELI 570
            +P T  ++   +   +F G  T+S   T+    +  Y E      EE   ++ K  +  V +D+L  ++ +  CIKE LR++P + +L R       +Q  E     IP G  +G SP F  R   I   P+++ P+RF      +K     +YI F  G   C+G+ FA L+IKAI +++LR++E E +
Sbjct:  300 KPLTNLDIREEVDTFMFEGHDTTSSGITFFFYNIALYPECQRKCVEEIVSVLGKDTETPVTYDLLNNLNYMDLCIKETLRMYPSVPLLGRK-----VLQECEINGKIIPAGTNIGISPLFLGRSEDISSEPNTFKPERFDVVTSAEKL-NPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIEFV 483          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.707e-15
Identity = 60/184 (32.61%), Postives = 95/184 (51.63%), Query Frame = 1
Query:   49 LFAGQHTSSITSTWTGAYLLKYKEYLSAVQEE--QKHLMKKHGK--RVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEL 588
            LF G  T++  +T    YL  Y   L  V+EE   K L+ K  +  ++D + L ++  +   IKE LRL+PP+    R +     ++T E   Y IPKG  V  S    + +  I+ N + ++PDRF     ED  A  FS+I FGGG   C+G+ FA + +K     L R+ +++L++  P +
Sbjct:  298 LFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYIGCVIKETLRLNPPVPGGFRVA-----LKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPED--ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTM 474          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15
Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 1
Query:   13 TESEVTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMK-KHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLL-RSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFEL 567
            T   + G++     AG  TS+IT  W  A L+K    +   QEE +  +  K  +R++ + + ++  L   IKE LRLHPP  +LL R + +D  +Q      YDIP+  I+  +     R P +++NP+ ++P+RF      D    +F  + FG GR  C G  F    ++    +LL  F++ L
Sbjct:  290 TIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQG-----YDIPRKTILLVNAWSIGRNPELWENPEEFNPERFI-DCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRL 470          
BLAST of DR908378 vs. ExPASy Swiss-Prot
Match: CP6D4_DROME (Probable cytochrome P450 6d4 OS=Drosophila melanogaster GN=Cyp6d4 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.912e-15
Identity = 52/183 (28.42%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   25 VTGLLIAALFAGQHTSSITSTWTGAYLLKYKEYLSAVQEEQKHLMKKHGKRVDHDILAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFTVQTREGKEYDIPKGHIVGTSPAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELIS 573
            +T        AGQ T+  T+ +T   L +Y E L  +Q+E    + K+  ++ +D L +M+ L  C++E +R +P L +L R    D+TV       + IPKG  V  S    +     + +P++YDP+RF+   EE +     +++ FG G   C+ +    +  K     +L+NF  E++S
Sbjct:  308 ITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKITYDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTV---PDTNHVIPKGTPVVISLYGIHHDAEYFPDPETYDPERFS---EESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMS 484          
The following BLAST results are available for this feature:
BLAST of DR908378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
CP26A_HUMAN4.492e-1633.15Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE... [more]
C6A13_DROME4.492e-1631.02Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
F3PH_ARATH5.867e-1630.39Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C76A1_SOLME7.662e-1629.19Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
CP6B5_PAPGL1.307e-1531.22Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus ... [more]
CP6B4_PAPGL1.307e-1531.22Cytochrome P450 6B4 OS=Papilio glaucus GN=CYP6B4 P... [more]
C4D10_DROMT1.307e-1530.00Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
CP26A_MOUSE1.707e-1532.61Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
C71B3_ARATH2.229e-1530.48Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
CP6D4_DROME2.912e-1528.42Probable cytochrome P450 6d4 OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16506 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-12_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908378 ID=DR908378; Name=DR908378; organism=Citrus sinensis; type=EST; length=653bp
GGCCGGCCCACAACTGAGTCTGAGGTCACTGGTTTACTCATTGCCGCTCT
TTTTGCTGGGCAGCACACCAGCTCAATCACCTCCACTTGGACTGGGGCCT
ATCTCCTCAAATACAAGGAGTATCTATCTGCTGTGCAGGAGGAACAAAAA
CACCTGATGAAAAAACACGGGAAAAGGGTTGATCATGATATCTTAGCTGA
GATGGATGTCCTCTATCGATGCATTAAGGAAGCCCTGAGACTACACCCTC
CACTGATCATGCTTTTGCGAAGCTCACACAGTGATTTTACTGTGCAGACC
CGTGAAGGTAAAGAATACGACATACCAAAGGGACACATAGTTGGAACATC
ACCAGCATTTGCAAACCGGCTTCCTCATATTTACAAGAATCCAGACAGTT
ACGATCCTGATAGGTTTGCTCCTGGAAGAGAAGAAGATAAGGCCGCTGGG
GCTTTCTCATATATTTCGTTTGGTGGGGGTAGGCATGGATGTCTTGGTGA
GCCTTTTGCATATCTGCAGATAAAGGCAATATGGAGCCATTTGTTAAGAA
ATTTTGAATTTGAGCTGATATCTCCTTTCCCTGAATTGATTGGAATGCAA
TGGTTGTTGGTGTCAAAGGAAAGGTGATGGTGCGTTACAAGCGCAAGGAA
CTT
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