DR908342

Overview
NameDR908342
Unique NameDR908342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA1_SYNY3 (Peptide methionine sulfoxide reductase msrA 1 OS=Synechocystis sp. (strain PCC 6803) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.466e-40
Identity = 87/161 (54.04%), Postives = 100/161 (62.11%), Query Frame = 2
Query:   98 GPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQ--LEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            G  L  P   G E A FG GCFWG E  F ++ GV  T VGY+ G  P+P Y+ VC+G T H EVV V FDPQ   Y  LL VFW  H+PT   RQG DVGTQYRSGIY Y+E Q + A  S +A Q  L+     +I TEILPA  FY AE+YHQQYL K
Sbjct:   37 GNPLKAPFPQGMETALFGLGCFWGAERKFWQIPGVYSTAVGYAAGYTPNPTYQEVCTGMTGHNEVVLVAFDPQQVSYDQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYTYSEAQQQAALASKQAYQQALQQAGYGEITTEILPAPDFYYAEDYHQQYLAK 197          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_ANASP (Peptide methionine sulfoxide reductase msrA 2 OS=Anabaena sp. (strain PCC 7120) GN=msrA2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39
Identity = 88/158 (55.70%), Postives = 97/158 (61.39%), Query Frame = 2
Query:  107 LDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQ--LEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            L  P   G E A FG GCFWG E  F +  GV  T VGY+ G  P+P Y  VC+G T H EVV V FDP+V  YT LL VFW  H+PT   RQG DVGTQYRSGIY Y+E Q +LA  S +A Q  L      KI TEIL A  FY AE YHQQYL K
Sbjct:   39 LKPPFPDGFEKALFGLGCFWGAERKFWQQQGVYSTAVGYAAGFTPNPTYDEVCTGLTGHNEVVLVVFDPKVISYTQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSEAQKQLAEASRDAYQQALSSAGYEKITTEILDAPEFYYAEAYHQQYLAK 196          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_METMA (Peptide methionine sulfoxide reductase msrA OS=Methanosarcina mazei GN=msrA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.720e-39
Identity = 83/172 (48.26%), Postives = 103/172 (59.88%), Query Frame = 2
Query:   71 DNNTTNPAVGPDLDRPDNPGH--EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGG 580
            D    N     D +  +NPG   E A F AGCFWG+E AF+++ GV  T VGYS G+   P Y  VC+  T H E VRV FDP++  Y  LL VFW  HDPTT +RQG DVG QYRS I+Y+++ Q   A  S E  +     +  +VTEI+P   FY AE+YHQQY EK G
Sbjct:   29 DAEQRNATSEEDTEIFENPGEGLEKATFAAGCFWGIEEAFRQIKGVVATAVGYSGGHFKRPTYEQVCTLDTGHAEAVRVIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSDEQKAAALASKEELEKSGAFKNPVVTEIVPVSEFYMAEDYHQQYFEKKG 200          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA1_ANASP (Peptide methionine sulfoxide reductase msrA 1 OS=Anabaena sp. (strain PCC 7120) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.537e-39
Identity = 80/151 (52.98%), Postives = 100/151 (66.23%), Query Frame = 2
Query:  134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGR 586
            E A FGAGCFWGVE AF++V GV  T VGY  G+ P+P Y  V S  T H EVV++++DPQ+  Y +LL+VFW  HDPTTLNRQG D G QYRS I+++NE QA  A++S    Q+  + +  IVTEI     +Y A E HQQY EK   R
Sbjct:   13 EKATFGAGCFWGVEAAFRKVKGVVSTSVGYMGGHFPNPCYLDVLSRITGHAEVVQIEYDPQLVSYEDLLAVFWDIHDPTTLNRQGPDKGEQYRSVIFFHNEQQAEAAQQSKAKVQVSGRFELDIVTEIKHKSEYYLATEEHQQYFEKQAKR 163          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_GEOMG (Peptide methionine sulfoxide reductase msrA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=msrA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.227e-38
Identity = 82/155 (52.90%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  119 DNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGG 583
            + P  E A FGAGCFW VE  F+RV GV  T  GY  G    P Y  VCS  T H EVV V +DP    Y  LL +FW  HDPT LNRQG D+GT YRS I+++   Q + AR SME +    +  R IVTEI  A  F+ AEEYHQQYLEK GG
Sbjct:    3 ETPELEKATFGAGCFWHVEAEFRRVSGVVATHAGYMGGWKDHPTYEEVCSKETGHAEVVEVVYDPARVSYDELLRIFWTIHDPTQLNRQGPDIGTNYRSVIFFHTPEQEQAARLSMEKEGGSGRYSRPIVTEIASASAFWWAEEYHQQYLEKRGG 157          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_VIBCM (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae serotype O1 (strain M66-2) GN=msrA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37
Identity = 83/161 (51.55%), Postives = 94/161 (58.39%), Query Frame = 2
Query:   98 GPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRK--IVTEILPAKRFYRAEEYHQQYLEK 574
            G  L      G +    G GCFWG E  F ++ GV  T VGYS G  P+P Y  VCSG T H EVVRV FDP+  P T LL  FW RHDPT   RQG D GTQYRS IY ++E Q  +A  S  A Q  +  Q +  I TEILPA  +Y AE YHQQYL K
Sbjct:   31 GSSLTAAPQSGQQQILIGMGCFWGAERLFWQLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_VIBCH (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae GN=msrA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37
Identity = 83/161 (51.55%), Postives = 94/161 (58.39%), Query Frame = 2
Query:   98 GPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRK--IVTEILPAKRFYRAEEYHQQYLEK 574
            G  L      G +    G GCFWG E  F ++ GV  T VGYS G  P+P Y  VCSG T H EVVRV FDP+  P T LL  FW RHDPT   RQG D GTQYRS IY ++E Q  +A  S  A Q  +  Q +  I TEILPA  +Y AE YHQQYL K
Sbjct:   31 GSSLTAAPQSGQQQILIGMGCFWGAERLFWQLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_VIBC3 (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=msrA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37
Identity = 83/161 (51.55%), Postives = 94/161 (58.39%), Query Frame = 2
Query:   98 GPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRK--IVTEILPAKRFYRAEEYHQQYLEK 574
            G  L      G +    G GCFWG E  F ++ GV  T VGYS G  P+P Y  VCSG T H EVVRV FDP+  P T LL  FW RHDPT   RQG D GTQYRS IY ++E Q  +A  S  A Q  +  Q +  I TEILPA  +Y AE YHQQYL K
Sbjct:   31 GSSLTAAPQSGQQQILIGMGCFWGAERLFWQLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBY (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain AYE) GN=msrA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRG 589
            A FG GCFW VE  F ++ GV K   GY+ G+   P Y  VC G T H EVV + FD Q   Y+ LL VF+  HDPTTLNRQG D+GTQYRS IYY+NE Q + A  +++  +    D   IVTE+ PA  FY AE+YHQ Y EK   +G
Sbjct:    4 ALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQTLK---DDDLDIVTELSPAPTFYPAEDYHQNYYEKNPSQG 150          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBS (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain SDF) GN=msrA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRG 589
            A FG GCFW VE  F ++ GV K   GY+ G+   P Y  VC G T H EVV + FD Q   Y+ LL VF+  HDPTTLNRQG D+GTQYRS IYY+NE Q + A  +++  +    D   IVTE+ PA  FY AE+YHQ Y EK   +G
Sbjct:    4 ALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQTLK---DDDLDIVTELSPAPTFYPAEDYHQNYYEKNPSQG 150          
The following BLAST results are available for this feature:
BLAST of DR908342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA1_SYNY33.466e-4054.04Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA2_ANASP1.009e-3955.70Peptide methionine sulfoxide reductase msrA 2 OS=A... [more]
MSRA_METMA1.720e-3948.26Peptide methionine sulfoxide reductase msrA OS=Met... [more]
MSRA1_ANASP8.537e-3952.98Peptide methionine sulfoxide reductase msrA 1 OS=A... [more]
MSRA_GEOMG7.227e-3852.90Peptide methionine sulfoxide reductase msrA OS=Geo... [more]
MSRA_VIBCM1.233e-3751.55Peptide methionine sulfoxide reductase msrA OS=Vib... [more]
MSRA_VIBCH1.233e-3751.55Peptide methionine sulfoxide reductase msrA OS=Vib... [more]
MSRA_VIBC31.233e-3751.55Peptide methionine sulfoxide reductase msrA OS=Vib... [more]
MSRA_ACIBY1.610e-3750.67Peptide methionine sulfoxide reductase msrA OS=Aci... [more]
MSRA_ACIBS1.610e-3750.67Peptide methionine sulfoxide reductase msrA OS=Aci... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16470 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908342 ID=DR908342; Name=DR908342; organism=Citrus sinensis; type=EST; length=661bp
TTACTTTTTCAGCGCCAGTTAGTTAGAGGAGCCTGCAGTTGCGGGAATTG
GGGAAATGGCCGGCACCGGAGATAACAACACGACGAATCCAGCTGTGGGT
CCGGATCTGGACCGACCGGACAATCCGGGTCACGAGTTCGCCCAATTCGG
AGCCGGGTGCTTCTGGGGAGTGGAGCTGGCGTTTCAGCGTGTGGTGGGCG
TATCCAAGACTGAAGTGGGGTATTCACAAGGCAACGTCCCTGATCCCAAC
TACAGACTCGTTTGCTCCGGAACCACCAATCACGTGGAGGTTGTTCGGGT
CCAGTTTGACCCGCAAGTTTGCCCCTACACCAATCTGCTCTCCGTTTTCT
GGGGCCGCCATGACCCCACCACGCTCAATCGCCAGGGAGCTGATGTGGGG
ACACAGTACAGATCAGGGATATACTATTACAATGAGACACAGGCTCGTTT
AGCCCGAGAGTCAATGGAAGCAAAGCAGTTGGAGATGAAGGATCAGAGGA
AGATTGTAACAGAGATTCTTCCTGCGAAGAGATTTTACAGAGCCGAGGAG
TACCATCAGCAGTATCTTGAAAAGGGTGGTGGCAGAGGCTCCAAGCAGTC
TGCTGAAAAGGGCTGCGATGAGCCCATCAGATGCTACGGTTGACGTTTGA
CCTTTTTATAG
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