DR908342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_CLAMS (Peptide methionine sulfoxide reductase msrA OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=msrA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25 Identity = 60/145 (41.38%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 155 GCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRG 589 GCFW ++ ++ + GV GY G+ P+Y VC+G T H E V+V FD +V P +L VF+ HDP LNRQGADVGTQYRS ++ + Q +L R+++ A+ ++ D VT I P ++ AE+YHQ + K G+G Sbjct: 9 GCFWCLDAVYRTLDGVQDVISGYIGGHTAHPSYDAVCTGATGHAEAVKVVFDEEVIPADVILDVFFTLHDPRQLNRQGADVGTQYRSAMFPADAEQEQLFRDAI-ARAGDLLDGTP-VTTIEPLGTWHDAEDYHQDFFAKNPGQG 151
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRAB_HELPY (Peptide methionine sulfoxide reductase msrA/msrB OS=Helicobacter pylori GN=msrAB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25 Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 92 AVGPDLDRPDNPGHEFAQ-------FGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574 A+G + +N G + + GCFWG+E +R+ GV GY+ G NY + ++H E V+V +DP+ LL ++ DP ++N+QG DVG QYR+GIYY N + +++A Q E+K KI E+ P K + RAEEYHQ YL+K Sbjct: 15 AIGAIMQASENMGSQHQKTDERVIYLAGGCFWGLEAYMERIYGVIDASSGYANGKTSSTNYEKLHE--SDHAESVKVIYDPKKISLDKLLRYYFKVVDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDHALKALQKEVKG--KIAIEVEPLKNYVRAEEYHQDYLKK 178
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_NOCFA (Peptide methionine sulfoxide reductase msrA OS=Nocardia farcinica GN=msrA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24 Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYL 568 A GCFWG++ +R GV T VGY+ G P YR H E V + +DP+ Y LL F+ HDPTT +RQG D+GT YRS I+Y ++ Q R+A +++ K+VTE+ PA F+ AE HQ YL Sbjct: 7 AILAGGCFWGMQDLIRRQPGVVSTRVGYTGGTNDHPTYR----NHPGHAEAVEIVYDPERTDYRALLEFFFQIHDPTTKDRQGNDIGTSYRSAIFYLDDEQRRVAEDTIADVDASGLWPGKVVTEVTPASEFWEAEPEHQDYL 145
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_LACSS (Peptide methionine sulfoxide reductase msrA OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=msrA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24 Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574 E A F GCFW + F + G+ K GY+ G+V +P Y VCS TT H E V + FDP V Y L+ ++W + DPT Q D G YR I+ ++ Q +A S E + IVT+I AK FY AE+YHQ + +K Sbjct: 4 ETAIFAGGCFWCMVHPFDQQPGILKVVSGYTGGHVANPTYEQVCSHTTGHTEAVEITFDPAVISYAELVEIYWRQTDPTDAMGQFQDRGDSYRPVIFVNSDQQRSIAEASKEKLIASGRFNEPIVTQIEAAKPFYPAEDYHQDFYKK 150
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_MYCPA (Peptide methionine sulfoxide reductase msrA OS=Mycobacterium paratuberculosis GN=msrA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574 A GCFWG++ ++ GV T VGY+ G+VP+ YR GT H E V + +DP V Y +L F+ HDPTT +RQG D G YRS I+Y ++ Q R+A +++ + K+VTE+ PA F+ AE HQ YL++ Sbjct: 7 AILAGGCFWGMQELIRKQPGVVSTRVGYTGGDVPNATYRN--HGT--HAEAVEIIYDPAVTDYRQILEFFFQIHDPTTKDRQGNDRGPSYRSAIFYTDDEQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYLQR 147
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAW (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain MW2) GN=msrA2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQ----RKIVTEILPAKRFYRAEEYHQQYLEK 574 E+A GCFW + F G+ GYS G+V +P Y VC+ T HVE V++ FDP+V + N+L +++ DPT Q D G Y+ I+Y++E Q + A E K+ ++ +Q + ++T I P K FY AE+YHQ Y +K Sbjct: 4 EYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAA----EFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAS (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain MSSA476) GN=msrA2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQ----RKIVTEILPAKRFYRAEEYHQQYLEK 574 E+A GCFW + F G+ GYS G+V +P Y VC+ T HVE V++ FDP+V + N+L +++ DPT Q D G Y+ I+Y++E Q + A E K+ ++ +Q + ++T I P K FY AE+YHQ Y +K Sbjct: 4 EYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAA----EFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAN (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain N315) GN=msrA2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQ----RKIVTEILPAKRFYRAEEYHQQYLEK 574 E+A GCFW + F G+ GYS G+V +P Y VC+ T HVE V++ FDP+V + N+L +++ DPT Q D G Y+ I+Y++E Q + A E K+ ++ +Q + ++T I P K FY AE+YHQ Y +K Sbjct: 4 EYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNKTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAA----EFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAM (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=msrA2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQ----RKIVTEILPAKRFYRAEEYHQQYLEK 574 E+A GCFW + F G+ GYS G+V +P Y VC+ T HVE V++ FDP+V + N+L +++ DPT Q D G Y+ I+Y++E Q + A E K+ ++ +Q + ++T I P K FY AE+YHQ Y +K Sbjct: 4 EYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNKTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAA----EFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA2_STAA8 (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=msrA2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQ----RKIVTEILPAKRFYRAEEYHQQYLEK 574 E+A GCFW + F G+ GYS G+V +P Y VC+ T HVE V++ FDP+V + N+L +++ DPT Q D G Y+ I+Y++E Q + A E K+ ++ +Q + ++T I P K FY AE+YHQ Y +K Sbjct: 4 EYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAA----EFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150 The following BLAST results are available for this feature:
BLAST of DR908342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 315
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908342 ID=DR908342; Name=DR908342; organism=Citrus sinensis; type=EST; length=661bpback to top |