DR908342

Overview
NameDR908342
Unique NameDR908342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_SERP5 (Peptide methionine sulfoxide reductase msrA OS=Serratia proteamaculans (strain 568) GN=msrA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.991e-37
Identity = 81/152 (53.29%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  128 GHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMK---DQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            G E A F  GCFWGVE  F +  GV  T  GYS G  P+P YR VCSG T H EVVRV FDP++  Y  LL VFW  HDP    RQG DVGTQYRS IY     Q   A  S++  Q  M+   D+R I TE+ PA  FY AE+ HQQYL K
Sbjct:   43 GLEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALPFYYAEDDHQQYLYK 194          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA1_CAUCR (Peptide methionine sulfoxide reductase msrA 1 OS=Caulobacter crescentus GN=msrA1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.363e-36
Identity = 83/161 (51.55%), Postives = 94/161 (58.39%), Query Frame = 2
Query:   98 GPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQ--LEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            G  L  P   G E A    GCFWGVE  F +V GV  T  GY+ G  P+P Y  VC+G T H EVV V FDP+V  Y  LL  FW  HDPT   RQG D+GTQYRSG+Y  ++ QA  A ES  A Q  L  +    I TEI PA  FY AE+YHQQYL K
Sbjct:   34 GHALKGPYPEGLETAIVAMGCFWGVERVFWKVPGVYVTAAGYAAGITPNPTYEEVCTGRTGHTEVVLVVFDPKVVTYEALLKTFWENHDPTQGMRQGNDIGTQYRSGLYVTSDAQAAAAAESKAAYQQALSARGLGTITTEIAPAGPFYFAEDYHQQYLAK 194          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_SULSO (Peptide methionine sulfoxide reductase msrA OS=Sulfolobus solfataricus GN=msrA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.780e-36
Identity = 71/147 (48.30%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            E A  G GCFW  E  ++RV GV   + GYS G+VP+P Y  VC+ TT H EVV++ FD  +  Y  +L +F+  HDPTTLNRQG DVGTQYRS I Y+NE Q ++A E +  +++E +  +K+VTE+ P + FY AE+YH  + +K
Sbjct:    2 EVATLGGGCFWCTEAVYKRVKGVISVKPGYSGGHVPNPTYEDVCTDTTGHAEVVQITFDSSIISYREILEIFFEIHDPTTLNRQGNDVGTQYRSIILYHNEEQRKIAEEMI--REVEKRIGKKVVTELKPFEVFYEAEDYHHDFYDK 146          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRAB_TREPA (Peptide methionine sulfoxide reductase msrB/msrA OS=Treponema pallidum GN=msrAB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.037e-36
Identity = 76/148 (51.35%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGG 583
            A F AGCFW  E  F+RV GV +  VGY+ G    P YR VC+GTT H E V + FDPQV  Y +LL  F+  HDPT+LN+QG DVGTQYRS I+Y + TQ + A   M       K  R +VT +  A+ FY AEEYHQ YL K  G
Sbjct:  129 ALFAAGCFWSTEAYFRRVKGVLRVRVGYTGGTTKSPTYRNVCTGTTGHAEAVEILFDPQVISYEDLLKHFFRMHDPTSLNKQGGDVGTQYRSAIFYLSGTQKQQAETLMGRYAGAGKFTRPLVTTLEEARDFYPAEEYHQDYLTKNPG 276          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_SULAC (Peptide methionine sulfoxide reductase msrA OS=Sulfolobus acidocaldarius GN=msrA PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 73/147 (49.66%), Postives = 95/147 (64.63%), Query Frame = 2
Query:  134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            E A  G GCFW  E  F+RV GV   + GYS G VP+P Y  VC+  T H EVV++ FDP V  Y  LL +F+  HDPTT NRQG DVG+QYRS I Y++E Q ++A E +  K  E K  +K+VTE++P + FY AE+YH  + +K
Sbjct:    2 EVATLGGGCFWCTEAVFKRVKGVVSVKPGYSGGKVPNPTYEEVCTDETGHAEVVQITFDPSVITYRELLEIFFEIHDPTTPNRQGNDVGSQYRSIILYHSEEQKKIAEEMI--KLYERKLGKKVVTELVPFEAFYEAEDYHHDFYDK 146          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=msrA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 72/149 (48.32%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGR 586
            A F AGCFWGVE  F+++ GV+ T VGY+ G+  +P YR VC+G T H E VRV +DP    Y  LL VFW  HDPT ++RQG D+G QYRS I+Y++  Q   A  S    +      R I T I PA  F+ AEEYHQ+Y++K   R
Sbjct:    4 ATFAAGCFWGVEETFRKIPGVTGTTVGYTGGHFKEPTYRQVCAGDTGHAEAVRVDYDPDKVTYEQLLDVFWAAHDPTQVDRQGPDIGDQYRSAIFYHDAGQEAAAGASRARLEQSGALSRAIATRIEPAGPFWPAEEYHQRYIDKQRAR 152          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_FRASN (Peptide methionine sulfoxide reductase msrA OS=Frankia sp. (strain EAN1pec) GN=msrA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 88/182 (48.35%), Postives = 99/182 (54.40%), Query Frame = 2
Query:   29 EPAVAGIGEMAGTGDNNTTNPAVGPDLDRPDNPGHEFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQ--LEMKDQRKIVTEILPAKRFYRAEEYHQQYL 568
            + A+ G G    TG +  T   +G  L  P   G   A FG GCFWG E  F +V GV  T VGY+ G  P+P Y   CSG T H E V V FDP    +  LL VFW  HDPT   RQG DVGTQYRS +Y   E QA  A  S +A Q  L      +I TEI PA  FY AEEYHQQYL
Sbjct:   14 DQALPGRGTPIFTGPDRHT--VLGASLLGPFPEGLRTAVFGMGCFWGAERKFWQVPGVYSTAVGYAGGITPNPTYEEACSGLTGHTEAVLVVFDPAKVSFAELLRVFWEAHDPTQGMRQGNDVGTQYRSAVYTTGEDQAAAALASRDAFQRVLTAAGYPEITTEIAPAGPFYYAEEYHQQYL 193          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_PASMU (Peptide methionine sulfoxide reductase msrA OS=Pasteurella multocida GN=msrA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  140 AQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYL 568
            A F  GCFW VE  F ++ GV K   GY  G   +P Y+ VC+G T H E V+V+FD  V  Y  LL +F+  H+PT LN QG DVGTQYR+GIYY N+ Q +LA + +   +L+     KIVTE+LPA+ FY AE+YHQ YL
Sbjct:    5 AIFAGGCFWCVEAVFNQIKGVEKATSGYINGTTENPTYKEVCTGETGHAEAVKVEFDATVISYEKLLDIFFSIHNPTQLNHQGEDVGTQYRTGIYYLNDEQEQLANKKI--AELQPHFAEKIVTEVLPAQTFYPAEDYHQGYL 145          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_METM6 (Peptide methionine sulfoxide reductase msrA OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=msrA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.835e-36
Identity = 71/147 (48.30%), Postives = 95/147 (64.63%), Query Frame = 2
Query:  134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            E A FG GCFW  E  F+++ GV  TEVG+  GN+ +P Y  VC G + H+EVV + ++P++  Y +LL +FW  HDPTT NRQG DVG QY S I+Y+ E Q  LA +S E  +++   + KIVT I  A  F+ AEEYHQ+Y  K
Sbjct:    5 ETAVFGMGCFWSAEELFRKINGVISTEVGFMGGNIKNPTYGQVCRGRSGHIEVVNIIYNPKILKYDDLLELFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQKLLAEKSFE--KIQKNSELKIVTAIRKASDFFPAEEYHQKYFMK 149          
BLAST of DR908342 vs. ExPASy Swiss-Prot
Match: MSRA_METM5 (Peptide methionine sulfoxide reductase msrA OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=msrA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.835e-36
Identity = 71/147 (48.30%), Postives = 95/147 (64.63%), Query Frame = 2
Query:  134 EFAQFGAGCFWGVELAFQRVVGVSKTEVGYSQGNVPDPNYRLVCSGTTNHVEVVRVQFDPQVCPYTNLLSVFWGRHDPTTLNRQGADVGTQYRSGIYYYNETQARLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEK 574
            E A FG GCFW  E  F+++ GV  TEVG+  G V +P Y  VC G + H+EVV + ++P++  YT+LL++FW  HDPTT NRQG DVG QY S I+Y+ E Q  LA +S E  +++     +IVT I  A  F+ AEEYHQ+Y  K
Sbjct:    5 ETAVFGMGCFWSAEELFRKIKGVISTEVGFMGGTVKNPTYGQVCRGKSGHIEVVNITYNPKIVKYTDLLNLFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQRLLAEKSFE--KIQKSSDLRIVTAIKKASDFFPAEEYHQKYFMK 149          
The following BLAST results are available for this feature:
BLAST of DR908342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA_SERP57.991e-3753.29Peptide methionine sulfoxide reductase msrA OS=Ser... [more]
MSRA1_CAUCR1.363e-3651.55Peptide methionine sulfoxide reductase msrA 1 OS=C... [more]
MSRA_SULSO1.780e-3648.30Peptide methionine sulfoxide reductase msrA OS=Sul... [more]
MSRAB_TREPA3.037e-3651.35Peptide methionine sulfoxide reductase msrB/msrA O... [more]
MSRA_SULAC5.179e-3649.66Peptide methionine sulfoxide reductase msrA OS=Sul... [more]
MSRA_RHORT5.179e-3648.32Peptide methionine sulfoxide reductase msrA OS=Rho... [more]
MSRA_FRASN5.179e-3648.35Peptide methionine sulfoxide reductase msrA OS=Fra... [more]
MSRA_PASMU6.765e-3650.35Peptide methionine sulfoxide reductase msrA OS=Pas... [more]
MSRA_METM68.835e-3648.30Peptide methionine sulfoxide reductase msrA OS=Met... [more]
MSRA_METM58.835e-3648.30Peptide methionine sulfoxide reductase msrA OS=Met... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16470 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908342 ID=DR908342; Name=DR908342; organism=Citrus sinensis; type=EST; length=661bp
TTACTTTTTCAGCGCCAGTTAGTTAGAGGAGCCTGCAGTTGCGGGAATTG
GGGAAATGGCCGGCACCGGAGATAACAACACGACGAATCCAGCTGTGGGT
CCGGATCTGGACCGACCGGACAATCCGGGTCACGAGTTCGCCCAATTCGG
AGCCGGGTGCTTCTGGGGAGTGGAGCTGGCGTTTCAGCGTGTGGTGGGCG
TATCCAAGACTGAAGTGGGGTATTCACAAGGCAACGTCCCTGATCCCAAC
TACAGACTCGTTTGCTCCGGAACCACCAATCACGTGGAGGTTGTTCGGGT
CCAGTTTGACCCGCAAGTTTGCCCCTACACCAATCTGCTCTCCGTTTTCT
GGGGCCGCCATGACCCCACCACGCTCAATCGCCAGGGAGCTGATGTGGGG
ACACAGTACAGATCAGGGATATACTATTACAATGAGACACAGGCTCGTTT
AGCCCGAGAGTCAATGGAAGCAAAGCAGTTGGAGATGAAGGATCAGAGGA
AGATTGTAACAGAGATTCTTCCTGCGAAGAGATTTTACAGAGCCGAGGAG
TACCATCAGCAGTATCTTGAAAAGGGTGGTGGCAGAGGCTCCAAGCAGTC
TGCTGAAAAGGGCTGCGATGAGCCCATCAGATGCTACGGTTGACGTTTGA
CCTTTTTATAG
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