DR908335

Overview
NameDR908335
Unique NameDR908335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_SYNY3 (Glycogen phosphorylase OS=Synechocystis sp. (strain PCC 6803) GN=glgP PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            ENFFLFG    +V K   E       +  +   +     I SG F   D   + PL+DSL G       D +LV  DF +Y++ Q++V +AYKDQ+ W +M+IL+ A  GKFSSDRTI +YA++IW I
Sbjct:  705 ENFFLFGLTTPEVEKTLAEGYQPWEYYNNNANLKAVVDLINSGFFSHGDTALFRPLMDSLLGQ------DPYLVFADFQAYVDCQNQVGEAYKDQENWARMAILNVARMGKFSSDRTIREYAEDIWAI 826          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYG_DROME (Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 45/125 (36.00%), Postives = 75/125 (60.00%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGL--FKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            +N F+FG   ++V  L+K+  +    +  +P  ++    I+ G F   + N   +  +    Y   D++ +  D+ +Y++AQD V + Y++Q KWL+MSI + A SGKFSSDRTIA+YA+EIW +
Sbjct:  707 DNIFIFGMTVDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKY---DHYYLLADYDAYIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGV 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_SHIFL (Glycogen phosphorylase OS=Shigella flexneri GN=glgP PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            +N F+FG  AE+V +LR++  +    ++ D    +    I SG F   D   Y  L+DSL        GD++ V  D+ SY++ QD+VD+ Y+ Q++W   ++L+ A  G FSSDRTI +YA  IW+I   R
Sbjct:  688 DNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSL-----INFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVR 814          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_ECOLI (Glycogen phosphorylase OS=Escherichia coli (strain K12) GN=glgP PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            +N F+FG  AE+V +LR++  +    ++ D    +    I SG F   D   Y  L+DSL        GD++ V  D+ SY++ QD+VD+ Y+ Q++W   ++L+ A  G FSSDRTI +YA  IW+I   R
Sbjct:  688 DNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSL-----INFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVR 814          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_YEAST (Glycogen phosphorylase OS=Saccharomyces cerevisiae GN=GPH1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY---DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK-KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            +N FLFG ++E V +LR   +          +    +I SG F      ++ PL+DS++ +     GDY+LV  DF SYL   + VDQ + +Q+ +WLK S+LS A  G FSSDR I +Y+  IWN+
Sbjct:  777 DNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNV 898          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_CHLTR (Glycogen phosphorylase OS=Chlamydia trachomatis GN=glgP PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = -3
Query:  290 ENFFLFGAVAEQVPKLRKER-EDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIT 661
            E+ F+FG + E++ +LRKE    G+   +P  +E    I    F   D   + P+++ L        GD F V  D  +Y+  Q+RV   +K  ++W K SI +  G G FSSDR+IA+YA  IWN++
Sbjct:  688 EHMFIFGLLEEEISELRKEYYPQGICNANPTIQEILDMIAQAKFSQEDKDLFKPIVNRL-----LNEGDPFFVLADLEAYINTQNRVASLFKQPEEWTKKSIYNVGGIGFFSSDRSIAEYASNIWNVS 810          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_CHLPN (Glycogen phosphorylase OS=Chlamydia pneumoniae GN=glgP PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKER-EDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG + EQ+ +LR+E     +   +P+  +    +  G F S D   + P++  L        GD F V  D  SY+ A + V++ +K+   W K+SI +TAG G FSSDR I  YA++IW++
Sbjct:  693 ENMFIFGLLEEQIVQLRREYCPQTICDKNPKIRQVLDLLEQGFFNSNDKDLFKPIVHRL-----LHEGDPFFVLADLESYIAAHENVNKLFKEPDSWTKISIYNTAGMGFFSSDRAIQDYARDIWHV 814          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_MOUSE (Glycogen phosphorylase, muscle form OS=Mus musculus GN=Pygm PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.915e-14
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V +L  R       +   P   +  + + SG F     +   D +     + R   F V  D+  Y++ QD+V + YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVERLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYIKCQDKVSELYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_HAEIN (Glycogen phosphorylase OS=Haemophilus influenzae GN=glgP PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.501e-14
Identity = 46/128 (35.94%), Postives = 68/128 (53.12%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            +N F+FG   EQV +LR+E  R    ++ D +       I  G F   D   Y+ LL  L+ +      DY+    DF SY+E Q  VD+ YK + +W++ +I +    G FSSDRTI +YA+ IW +
Sbjct:  693 DNIFIFGNTVEQVEQLRREGYRSFEYYQNDAQLRTVVDQIIEGKFSPEDPQRYHQLLQGLQYH------DYYQAFADFRSYVETQKAVDEKYKQRDQWIESTIQNIVNMGFFSSDRTIKEYAERIWKV 814          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSM_ECOLI (Maltodextrin phosphorylase OS=Escherichia coli (strain K12) GN=malP PE=1 SV=7)

HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14
Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = -3
Query:  299 ENFFLFGAVAEQVPKLRKEREDGLF--KPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 661
            EN F+FG   EQV  +  +  D +   K D   +   + + SG +   D +   D +  + G   GD +LV  DF +Y+EAQ +VD  Y+DQ+ W + +IL+TA  G FSSDR+I  Y   IW
Sbjct:  672 ENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAF-DQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 793          
The following BLAST results are available for this feature:
BLAST of DR908335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PHSG_SYNY34.870e-1841.41Glycogen phosphorylase OS=Synechocystis sp. (strai... [more]
PYG_DROME2.672e-1636.00Glycogen phosphorylase OS=Drosophila melanogaster ... [more]
PHSG_SHIFL2.672e-1637.12Glycogen phosphorylase OS=Shigella flexneri GN=glg... [more]
PHSG_ECOLI2.672e-1637.12Glycogen phosphorylase OS=Escherichia coli (strain... [more]
PHSG_YEAST4.559e-1638.58Glycogen phosphorylase OS=Saccharomyces cerevisiae... [more]
PHSG_CHLTR1.732e-1535.16Glycogen phosphorylase OS=Chlamydia trachomatis GN... [more]
PHSG_CHLPN1.732e-1535.43Glycogen phosphorylase OS=Chlamydia pneumoniae GN=... [more]
PYGM_MOUSE1.915e-1436.43Glycogen phosphorylase, muscle form OS=Mus musculu... [more]
PHSG_HAEIN2.501e-1435.94Glycogen phosphorylase OS=Haemophilus influenzae G... [more]
PHSM_ECOLI3.267e-1437.40Maltodextrin phosphorylase OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16463 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908335 ID=DR908335; Name=DR908335; organism=Citrus sinensis; type=EST; length=663bp
CTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTTCAAA
ACCTGGAAATTCTTATAAAGATAGAATTGTTTAAGAAATTACAACTTAAA
ACTTATCTGACAGAGCGATGTTTGAGTAAACAAATGATGGTTAAGACGGA
GAGACAGGTTTATTTAATGATCCCCACAGATTGTGGATTTCCTTTCATTT
TCTTCCCATCTTAATACATCCTTCCAAGAAATTATATAACCTATTGCACA
TGAAAATTTTTTGCACTTGAATCATGATGTACGGCATTCTGTTATGTTCC
AGATTTCCTTAGCATACTGTGCAATTGTGCGATCACTGCTGAATTTCCCA
CTGCCAGCTGTACTTAATATAGACATCTTCAGCCACTTCTTCTGGTCCTT
GTAAGCTTGGTCAACTCTGTCCTGAGCCTCTAAGTAACTTGGGAAGTCAT
AACCAACTAGAAAATAATCACCACGACCATAACCAGTGTTCCCCTCCAGG
GAATCAAGAAGCGGGTTGTAGTCATAGCTTCCAAATGCTCCACTTCTTAT
AAATTGCTTGGCCTCTTCAAACCGAGGATCTGGTTTGAACAATCCATCTT
CTCTTTCCTTACGCAGCTTAGGGACTTGTTCTGCTACTGCACCAAAGAGA
AAGAAATTCTCCT
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