DR908335

Overview
NameDR908335
Unique NameDR908335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_MACFA (Glycogen phosphorylase, muscle form OS=Macaca fascicularis GN=PYGM PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V KL  R       +   P   +  + + SG F     +   D +     + R   F V  D+  Y++ Q++V   YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVDKLDQRGYNAQEYYDRIPELRQVIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEDYIKCQEKVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_HUMAN (Glycogen phosphorylase, muscle form OS=Homo sapiens GN=PYGM PE=1 SV=6)

HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V KL  R       +   P   +  + + SG F     +   D +     + R   F V  D+  Y++ Q++V   YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVDKLDQRGYNAQEYYDRIPELRQVIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEDYIKCQEKVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_RAT (Glycogen phosphorylase, muscle form OS=Rattus norvegicus GN=Pygm PE=2 SV=5)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIR--SGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            +NFF+FG   E V +L +   +     D R  E +Q I   S  F S     L   +     +   D F V  D+  Y++ QD+V + YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 DNFFIFGMRVEDVERLDQRGYNAQEYYD-RIPELRQIIEQLSSGFFSPKQPDLFKDIVNMVMHH--DRFKVFADYEEYIKCQDKVSELYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGLEPSR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_RABIT (Glycogen phosphorylase, muscle form OS=Oryctolagus cuniculus GN=PYGM PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKL--RKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V +L  R       +   P   +  + + SG F     +   D +     + R   F V  D+  Y++ Q+RV   YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_PONAB (Glycogen phosphorylase, brain form OS=Pongo abelii GN=PYGB PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPD--PRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L ++  +     D  P  ++A   I SG F   + N   D +     + R   F V  D+ +Y++ Q +VDQ Y++ K+W K  I + A SGKFSSDRTI +YA+EIW +
Sbjct:  707 ENLFIFGLQVEDVEALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPNCFKDIVNMLMHHDR---FKVFADYEAYMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_BOVIN (Glycogen phosphorylase, muscle form OS=Bos taurus GN=PYGM PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKEREDGLFKPD--PRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V +L ++  +     D  P        + SG F     +   D +     + R   F V  D+  Y++ Q+RV   YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVERLDQKGYNAQEYYDRIPELRHVIDQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYIKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPTR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_CHLMU (Glycogen phosphorylase OS=Chlamydia muridarum GN=glgP PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.621e-13
Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  287 ENFFLFGAVAEQVPKLRKER-EDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 661
            E+ F+FG + E++  LR E    G+   +P+ +E    +        D   + P+++ L        GD F V  D  SYL+A +RV + +   ++W K SI +  G G FSSDR+I  YA  IWN+++
Sbjct:  688 EHMFIFGLLEEEISALRNEYYPQGICNANPKIQEILDMVLQARLPEEDKDLFKPIVNRL-----LNEGDPFFVLADLESYLDAHNRVARLFTQPEEWTKKSIYNVGGIGFFSSDRSITDYASNIWNVSQ 811          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGM_SHEEP (Glycogen phosphorylase, muscle form OS=Ovis aries GN=PYGM PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = -3
Query:  281 ENFFLFGAVAEQVPKLRKEREDGLFKPD--PRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 661
            ENFF+FG   E V +L ++  +     D  P        + SG F     +   D +     + R   F V  D+  Y++ Q+RV   YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW +   R
Sbjct:  707 ENFFIFGMRVEDVERLDQKGYNAQEYYDRIPELRHIIDQLSSGFFSPKQPDLFKDIVNMLMHHDR---FKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPTR 832          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_PASMU (Glycogen phosphorylase OS=Pasteurella multocida GN=glgP PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            ++ F+FG   EQV  LR+   R    ++ D    +    I SG F   D   Y+ LL SL+ +      DY+    DF SY++ Q  VD  Y+DQ  W+  ++ +      FSSDRTI +YA++IW I
Sbjct:  693 DHIFIFGNTVEQVESLRRHGYRPFDYYQNDEELRKVVDQIISGRFSPTDANRYHQLLQSLQYH------DYYQAFADFRSYVDMQQNVDAKYQDQNAWIDSTLQNIVNMSYFSSDRTILEYAEKIWKI 814          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_MOUSE (Glycogen phosphorylase, brain form OS=Mus musculus GN=Pygb PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L ++  +    ++  P   +A   I SG F   D +   D +     + R   F V  D+ +Y++ Q +VD+ Y++ K+W K  I + A SGKFSSDRTI +YA+EIW +
Sbjct:  707 ENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVDQISSGFFSPKDPDCFKDVVNMLMYHDR---FKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828          
The following BLAST results are available for this feature:
BLAST of DR908335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PYGM_MACFA4.267e-1436.43Glycogen phosphorylase, muscle form OS=Macaca fasc... [more]
PYGM_HUMAN4.267e-1436.43Glycogen phosphorylase, muscle form OS=Homo sapien... [more]
PYGM_RAT5.572e-1437.98Glycogen phosphorylase, muscle form OS=Rattus norv... [more]
PYGM_RABIT7.278e-1436.43Glycogen phosphorylase, muscle form OS=Oryctolagus... [more]
PYGB_PONAB7.278e-1437.60Glycogen phosphorylase, brain form OS=Pongo abelii... [more]
PYGM_BOVIN1.621e-1336.43Glycogen phosphorylase, muscle form OS=Bos taurus ... [more]
PHSG_CHLMU1.621e-1332.56Glycogen phosphorylase OS=Chlamydia muridarum GN=g... [more]
PYGM_SHEEP2.766e-1336.43Glycogen phosphorylase, muscle form OS=Ovis aries ... [more]
PHSG_PASMU2.766e-1335.16Glycogen phosphorylase OS=Pasteurella multocida GN... [more]
PYGB_MOUSE3.612e-1336.00Glycogen phosphorylase, brain form OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16463 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908335 ID=DR908335; Name=DR908335; organism=Citrus sinensis; type=EST; length=663bp
CTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTTCAAA
ACCTGGAAATTCTTATAAAGATAGAATTGTTTAAGAAATTACAACTTAAA
ACTTATCTGACAGAGCGATGTTTGAGTAAACAAATGATGGTTAAGACGGA
GAGACAGGTTTATTTAATGATCCCCACAGATTGTGGATTTCCTTTCATTT
TCTTCCCATCTTAATACATCCTTCCAAGAAATTATATAACCTATTGCACA
TGAAAATTTTTTGCACTTGAATCATGATGTACGGCATTCTGTTATGTTCC
AGATTTCCTTAGCATACTGTGCAATTGTGCGATCACTGCTGAATTTCCCA
CTGCCAGCTGTACTTAATATAGACATCTTCAGCCACTTCTTCTGGTCCTT
GTAAGCTTGGTCAACTCTGTCCTGAGCCTCTAAGTAACTTGGGAAGTCAT
AACCAACTAGAAAATAATCACCACGACCATAACCAGTGTTCCCCTCCAGG
GAATCAAGAAGCGGGTTGTAGTCATAGCTTCCAAATGCTCCACTTCTTAT
AAATTGCTTGGCCTCTTCAAACCGAGGATCTGGTTTGAACAATCCATCTT
CTCTTTCCTTACGCAGCTTAGGGACTTGTTCTGCTACTGCACCAAAGAGA
AAGAAATTCTCCT
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