DR908335

Overview
NameDR908335
Unique NameDR908335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_HUMAN (Glycogen phosphorylase, brain form OS=Homo sapiens GN=PYGB PE=1 SV=5)

HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13
Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDGLFKPD--PRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L ++  +     D  P  ++A   I SG F   + +   D +     + R   F V  D+ +Y++ Q +VDQ Y++ K+W K  I + A SGKFSSDRTI +YA+EIW +
Sbjct:  707 ENLFIFGLRVEDVEALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDR---FKVFADYEAYMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_RAT (Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus GN=Pygb PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L ++  +    ++  P   +A   I SG F   D +   D +     + R   F V  D+ +Y++ Q +VD  Y++ K W K  I + A SGKFSSDRTI +YA+EIW +
Sbjct:  707 ENLFIFGMRVEDVEALDQKGYNAQEFYERLPELRQAVDQISSGFFSPKDPDCFKDVVNMLMYHDR---FKVFADYEAYIQCQAQVDHLYRNPKDWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_SHEEP (Glycogen phosphorylase, brain form OS=Ovis aries GN=PYGB PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = -3
Query:  299 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 661
            EN F+FG   E V  L ++  +    +   P  ++A   I SG F   + +   D +     + R   F V  D+ +Y+  Q +VDQ Y++ K+W K  I + A SGKFSSDRTI +YA++IW
Sbjct:  707 ENLFIFGLRVEDVEALDRKGYNAHEYYNHLPELQQAVDQINSGFFSPREPDCFKDVVNMLLNHDR---FKVFADYEAYVACQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYARDIW 826          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PHSG_BACSU (Glycogen phosphorylase OS=Bacillus subtilis GN=glgP PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = -3
Query:  293 FLFGAVAEQVPKLRKE---REDGLFKPDPRFEEAKQFIRSGAF-GSYD-YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 652
            + FG  A++V   ++    R    ++ D R  +    + +G F G  D +  + DSL         D + V  DF SY +AQ+R+   Y++++KW + SI++ A SG FSSDRTI +YAK+IW I
Sbjct:  675 YTFGLKADEVLSYQENGGYRSREYYQHDRRIRQVADQLINGFFEGEADEFESIFDSL-----LPHNDEYFVLKDFSSYADAQERIQADYRERRKWSEHSIVNIAHSGYFSSDRTIREYAKDIWGI 794          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGB_BOVIN (Glycogen phosphorylase, brain form OS=Bos taurus GN=PYGB PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12
Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = -3
Query:  299 ENFFLFGAVAEQVPKLRKEREDGLFKPD--PRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 661
            EN F+FG   E V  L ++  +     D  P   +A   I  G F   + +   D +     + R   F V  D+ +Y+  Q RVDQ Y++ K+W K  I + A SGKFSSDRTI +YA +IW
Sbjct:  707 ENLFIFGLRVEDVEALDRKGYNAHEYYDRLPELRQAVDQINGGFFSPREPDCFKDVVNMLLNHDR---FKVFADYEAYVACQARVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAHDIW 826          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGL_RAT (Glycogen phosphorylase, liver form OS=Rattus norvegicus GN=Pygl PE=1 SV=5)

HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   + V  L K+  +    ++  P  +     I +G F S +   L   +     Y   D F V  D+ +Y++ Q++V Q Y +QK W  M + + A SGKFSSDRTI +YAK+IWN+
Sbjct:  707 ENLFIFGMRVDDVAALDKKGYEAKEYYEALPELKLVIDQIDNGFF-SPNQPDLFKDIINMLFYH--DRFKVFADYEAYVKCQEKVSQLYMNQKAWNTMVLRNIAASGKFSSDRTIREYAKDIWNM 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGL_MOUSE (Glycogen phosphorylase, liver form OS=Mus musculus GN=Pygl PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   + V  L K+  +    ++  P  +     I +G F S +   L   +     Y   D F V  D+ +Y++ Q++V Q Y +QK W  M + + A SGKFSSDRTI +YAK+IWN+
Sbjct:  707 ENLFIFGMRVDDVAALDKKGYEAKEYYEALPELKLVIDQIDNGFF-SPNQPDLFKDIINMLFYH--DRFKVFADYEAYVKCQEKVSQLYMNQKAWNTMVLKNIAASGKFSSDRTIKEYAKDIWNM 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGL_SHEEP (Glycogen phosphorylase, liver form OS=Ovis aries GN=PYGL PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11
Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L K+  +    ++  P  + A   I  G F S     L   L     Y   D F V  D+ +Y++ Q++V Q Y + K W  M + + A SGKFSSDRTI +YA++IWN+
Sbjct:  707 ENLFIFGMRVEDVAALDKKGYEAKEYYEALPELKLAIDQIDKGFF-SPKQPDLFKDLVNMLFYH--DRFKVFADYEAYVKCQEKVSQLYMNPKAWNIMVLKNIAASGKFSSDRTIKEYARDIWNM 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGL_BOVIN (Glycogen phosphorylase, liver form OS=Bos taurus GN=PYGL PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   E V  L K+  +    ++  P  + A   I  G F S     L   L     Y   D F V  D+ +Y++ Q++V Q Y + K W  M + + A SGKFSSDRTI +YA++IWN+
Sbjct:  707 ENLFIFGMRIEDVAALDKKGYEAKEYYEALPELKLAIDQIDKGFF-SPKQPDLFKDLVNMLFYH--DRFKVFADYEAYVKCQEKVSQLYMNPKAWNIMVLKNIAASGKFSSDRTIKEYARDIWNM 828          
BLAST of DR908335 vs. ExPASy Swiss-Prot
Match: PYGL_HUMAN (Glycogen phosphorylase, liver form OS=Homo sapiens GN=PYGL PE=1 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = -3
Query:  293 ENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 661
            EN F+FG   + V  L K+  +    ++  P  +     I +G F     +   D +     + R   F V  D+ +Y++ QD+V Q Y + K W  M + + A SGKFSSDRTI +YA+ IWN+
Sbjct:  707 ENLFIFGMRIDDVAALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDR---FKVFADYEAYVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNV 828          
The following BLAST results are available for this feature:
BLAST of DR908335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PYGB_HUMAN3.612e-1336.80Glycogen phosphorylase, brain form OS=Homo sapiens... [more]
PYGB_RAT1.051e-1236.00Glycogen phosphorylase, brain form (Fragment) OS=R... [more]
PYGB_SHEEP1.793e-1235.77Glycogen phosphorylase, brain form OS=Ovis aries G... [more]
PHSG_BACSU5.216e-1235.20Glycogen phosphorylase OS=Bacillus subtilis GN=glg... [more]
PYGB_BOVIN8.897e-1236.59Glycogen phosphorylase, brain form OS=Bos taurus G... [more]
PYGL_RAT1.162e-1136.00Glycogen phosphorylase, liver form OS=Rattus norve... [more]
PYGL_MOUSE1.162e-1136.00Glycogen phosphorylase, liver form OS=Mus musculus... [more]
PYGL_SHEEP3.381e-1136.80Glycogen phosphorylase, liver form OS=Ovis aries G... [more]
PYGL_BOVIN4.415e-1136.80Glycogen phosphorylase, liver form OS=Bos taurus G... [more]
PYGL_HUMAN9.836e-1133.60Glycogen phosphorylase, liver form OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16463 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908335 ID=DR908335; Name=DR908335; organism=Citrus sinensis; type=EST; length=663bp
CTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTTCAAA
ACCTGGAAATTCTTATAAAGATAGAATTGTTTAAGAAATTACAACTTAAA
ACTTATCTGACAGAGCGATGTTTGAGTAAACAAATGATGGTTAAGACGGA
GAGACAGGTTTATTTAATGATCCCCACAGATTGTGGATTTCCTTTCATTT
TCTTCCCATCTTAATACATCCTTCCAAGAAATTATATAACCTATTGCACA
TGAAAATTTTTTGCACTTGAATCATGATGTACGGCATTCTGTTATGTTCC
AGATTTCCTTAGCATACTGTGCAATTGTGCGATCACTGCTGAATTTCCCA
CTGCCAGCTGTACTTAATATAGACATCTTCAGCCACTTCTTCTGGTCCTT
GTAAGCTTGGTCAACTCTGTCCTGAGCCTCTAAGTAACTTGGGAAGTCAT
AACCAACTAGAAAATAATCACCACGACCATAACCAGTGTTCCCCTCCAGG
GAATCAAGAAGCGGGTTGTAGTCATAGCTTCCAAATGCTCCACTTCTTAT
AAATTGCTTGGCCTCTTCAAACCGAGGATCTGGTTTGAACAATCCATCTT
CTCTTTCCTTACGCAGCTTAGGGACTTGTTCTGCTACTGCACCAAAGAGA
AAGAAATTCTCCT
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