DR908331

Overview
NameDR908331
Unique NameDR908331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 45/125 (36.00%), Postives = 62/125 (49.60%), Query Frame = 1
Query:   10 VKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 381
            V  F   Y T           G S   G+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP +G  +A   +
Sbjct:  114 VACFLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:   73 GYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 381
            G S   G+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP IG  +A   +
Sbjct:  135 GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   58 NELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 381
            + +A G  +  G+  EII TF LVYTV++ A DPK+ +    +  +APL IG  V    LA  P +G  +NPARS G AV       +   W++WVGP IG  +A   +
Sbjct:  131 HSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = 1
Query:    7 LVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            + K F  + Y  +  G       YS       E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    WLFWV P IG A+    ++++
Sbjct:  112 VTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWL 226          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 1
Query:   73 GYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G S    L  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +W+ QW++WVGP IG  +A   ++ +
Sbjct:  137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 1
Query:  103 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILR 396
            E + TF+LV+ V + +DP R      +   APL +G A+   HL  I ++G  +NPARS G AV+      W   W++WVGP  G  +A   ++ I +
Sbjct:  142 EALITFILVFVVKAVSDPGRQ----DIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQG---VWTYHWVYWVGPIAGGLLAGIIYRLIFK 232          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 1
Query:   49 GGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 405
            GG  EL        G+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP IG  +A   +  +   G+
Sbjct:  135 GGTTELE-------GVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV---AAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGGS 240          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   73 GYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 405
            G S   G+  E++ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP +G  +A   +  +   G+
Sbjct:  135 GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVYGDVFIGGS 239          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 1
Query:   49 GGANELADGYSTGVGL----AAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQ 384
            GG    A G S GVG+      EI+ TF LVYTV++ A DPK  +    +  +AP+ IGF V    LA    +G  +NPA + G AV+      W + W++W GP +G  IA   ++
Sbjct:  126 GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYE 235          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = 1
Query:   58 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  +A+  + F+L
Sbjct:  119 NTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLASLLYDFLL 223          
The following BLAST results are available for this feature:
BLAST of DR908331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
TIP23_MAIZE5.264e-1236.00Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ORYSJ6.875e-1240.38Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH6.875e-1239.45Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQPZ_BRAJA6.875e-1232.03Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP11_ORYSJ8.980e-1237.38Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP_DROME8.980e-1235.71Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP22_MAIZE1.173e-1137.50Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_MAIZE1.173e-1136.61Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP11_ARATH1.532e-1137.61Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_RABIT1.532e-1133.93Lens fiber major intrinsic protein OS=Oryctolagus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16459 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-42_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908331 ID=DR908331; Name=DR908331; organism=Citrus sinensis; type=EST; length=664bp
GTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGG
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCG
CCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACT
GATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCT
CCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCA
CTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTAC
AACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTT
CATTGGTGCAGCAATTGCAGCTTTCTACCACCAATTCATCTTGAGAGCTG
GAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATTT
TAGTTTCTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTT
AAAATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAA
AAGTGAATAATGAGGGGGGTGTGATTTGTGCTTTCAAGGAGTTGTAGGCA
AAAAGTCTCTTAGACATGAGGGCTTTTTTGTAATCCCCTGTGTTGTTTTC
AAGCACTTTCCTTA
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