DR908331

Overview
NameDR908331
Unique NameDR908331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   46 GGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  147 GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.697e-16
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   46 GGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  144 GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   46 GGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  144 GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 1
Query:   52 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILR 396
            G +  +   + G  +  E + TF+LV  V   +DP R+     +   APL +G ++   HL  I +TG  +NPARS G AV+ N    W D W++WVGP +GA +AA  ++F+ +
Sbjct:  131 GVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   46 GGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G G   +    S G GL  E+I TF LV+T+F++ D KR+     +     L IG +V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  144 GLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   64 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            +A G S   GL  EII TF LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+ G A++  +   W + W++WVGPFIG A+AA  +++++
Sbjct:  143 VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   64 LADGYSTGVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            LA G     GL  EII TF LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+ G A++  +   W D W++WVGPFIG+A+AA  +++++
Sbjct:  143 LASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   46 GGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W + W++WVGP +GA +A   ++++
Sbjct:  144 GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15
Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 1
Query:   49 GGANELADGYSTGVG----LAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            GGA   A   S GVG    +  EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA  +  I
Sbjct:  126 GGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-15
Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 1
Query:   31 YYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            Y  R     N L +  + G  + AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AVI ++  +    W+FWVGP +GAA AA  + ++L
Sbjct:  111 YNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
The following BLAST results are available for this feature:
BLAST of DR908331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
AQP4_NOTAL2.065e-1639.13Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME2.697e-1639.13Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_HUMAN3.523e-1639.13Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP_HAEIX6.009e-1635.65Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP4_BOVIN6.009e-1639.13Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP32_ARATH7.848e-1642.34Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ARATH1.025e-1542.34Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQP4_MOUSE1.339e-1538.26Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
TIP12_ORYSJ2.284e-1543.70Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP5_SHEEP3.895e-1540.98Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16459 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-42_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908331 ID=DR908331; Name=DR908331; organism=Citrus sinensis; type=EST; length=664bp
GTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGG
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCG
CCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACT
GATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCT
CCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCA
CTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTAC
AACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTT
CATTGGTGCAGCAATTGCAGCTTTCTACCACCAATTCATCTTGAGAGCTG
GAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATTT
TAGTTTCTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTT
AAAATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAA
AAGTGAATAATGAGGGGGGTGTGATTTGTGCTTTCAAGGAGTTGTAGGCA
AAAAGTCTCTTAGACATGAGGGCTTTTTTGTAATCCCCTGTGTTGTTTTC
AAGCACTTTCCTTA
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