DR908331

Overview
NameDR908331
Unique NameDR908331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 1
Query:    7 LVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQ--WLFWVGPFIGAAIAAFYHQFI 390
            + K F  + Y  +  G      GYS    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS G A+       W  Q  WLFW+ P IGA + A  ++ I
Sbjct:  110 VAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.636e-13
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1
Query:   64 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 381
            +A G     G+  EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARS G AV       +   W++W GP IG A+A F +
Sbjct:  133 VAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIY 232          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 1
Query:   73 GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 390
            GYS    L  E++ T + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    WLFWV P +GA + A  ++ I
Sbjct:  127 GYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1
Query:   52 GANELADG-YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A+  ++  A    WLFWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1
Query:   52 GANELADG-YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A+  ++  A    WLFWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   52 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            G N + +  STG  +A E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARS G A+I  K   +   W+FWVGP +GA +A+  + F+L
Sbjct:  131 GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   58 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            N L +  + G  +  E+  T  LV  +F++TD +R            L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA I +  + ++L
Sbjct:  119 NALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   64 LADGYSTGVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            LA G   G  +  E + TF  VY  ++   DPKR     H+  +APL +GF +    LA  P  G G+NPAR  G A++  +   W   W++W+GPF+GA +A   ++++L
Sbjct:  144 LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 1
Query:   52 GANELADG-YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 393
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    WLFWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of DR908331 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.761e-13
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1
Query:   64 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 381
            +A G +   G+  EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   W++W GP IG  +A F +
Sbjct:  133 VAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
The following BLAST results are available for this feature:
BLAST of DR908331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
AQPZ_CHRVO9.594e-1434.62Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP_ANTMA1.636e-1342.06Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQPZ_VIBVU2.791e-1336.79Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUAB2.791e-1338.26Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.791e-1338.26Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP6_HUMAN2.791e-1336.84Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_RAT2.791e-1336.61Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP32_MAIZE3.646e-1336.04Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQPZ_BRUSU3.646e-1338.26Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP2_TOBAC4.761e-1340.19Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16459 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-42_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908331 ID=DR908331; Name=DR908331; organism=Citrus sinensis; type=EST; length=664bp
GTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGG
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCG
CCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACT
GATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCT
CCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCA
CTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTAC
AACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTT
CATTGGTGCAGCAATTGCAGCTTTCTACCACCAATTCATCTTGAGAGCTG
GAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATTT
TAGTTTCTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTT
AAAATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAA
AAGTGAATAATGAGGGGGGTGTGATTTGTGCTTTCAAGGAGTTGTAGGCA
AAAAGTCTCTTAGACATGAGGGCTTTTTTGTAATCCCCTGTGTTGTTTTC
AAGCACTTTCCTTA
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