DR908330

Overview
NameDR908330
Unique NameDR908330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_DEBHA (Histone chaperone ASF1 OS=Debaryomyces hansenii GN=ASF1 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.123e-46
Identity = 86/146 (58.90%), Postives = 113/146 (77.40%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  + VL+NPA F +P++FEI++ECL PLK+DLEWKL YVGS+    +DQ L+S+LVGPV VG  +F+ QADPP P  I   +++ VTV+LL+CSY  +EFVRVGYYVNN+YD E+LRE PP K  ++ V RNILA+KPRV
Sbjct:    1 MSIVSLLGIEVLNNPAKFTDPYEFEITFECLEPLKEDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGINKFLFQADPPSPELIPASELVSVTVILLSCSYADREFVRVGYYVNNEYDSEELRENPPAKVQVEHVVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_CANGA (Histone chaperone ASF1 OS=Candida glabrata GN=ASF1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.267e-46
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  + VL+NPA F +P++FEI++ECL PLK+DLEWKL YVGS+    +DQ L+S+LVGPV VG  +FV  ADPP    I   +++ VTV+LL+CSY G+EFVRVGYYVNN+YD E+LRE PP K  +D + RNILA+KPRV
Sbjct:    1 MSIVSLLGIKVLNNPAKFTDPYEFEITFECLEPLKNDLEWKLTYVGSSRSLEHDQELDSILVGPVPVGVNKFVFTADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDSEELRENPPQKVQVDHIVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_ASPOR (Histone chaperone asf1 OS=Aspergillus oryzae GN=asf1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.267e-46
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  V + +NPA FL P+QFEI++ECL  L+ DLEWKL YVGSA    YDQ L+S+ VGP+ VG  +F+ +A+ PD  +I   +I+GVTV+LLTCSY G+EFVRVGYYVNN+YD E L  EPP K +I+R++RNILA+KPRV
Sbjct:    1 MSVVSLLGVKIQNNPAPFLAPYQFEITFECLEQLQKDLEWKLTYVGSATSSEYDQELDSLFVGPIPVGVNKFIFEAEAPDLKRIPTSEILGVTVILLTCSYDGREFVRVGYYVNNEYDSEDLSAEPPAKPIIERIRRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_NEUCR (Histone chaperone asf-1 OS=Neurospora crassa GN=asf-1 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 81/146 (55.48%), Postives = 117/146 (80.14%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  V V++NPA F + + FEI++ECL  L+ DLEWKL YVGSA  + YDQ L+S+LVGP+ VG  +F+ +A+PPD  +I  ++++GVTV+LLTC+Y G+EFVRVGYYVNN+Y+ E+L  +PPPK +I++++RN+LA+KPRV
Sbjct:    1 MSVVSLLGVNVMNNPAKFTDKYLFEITFECLEHLEKDLEWKLTYVGSATSDNYDQELDSLLVGPIPVGVNKFIFEAEPPDTKRIPIDELLGVTVILLTCAYDGREFVRVGYYVNNEYESEELINDPPPKPVIEKIRRNVLAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_CANAL (Histone chaperone ASF1 OS=Candida albicans GN=ASF1 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.241e-45
Identity = 85/146 (58.22%), Postives = 113/146 (77.40%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++T + VL+NPA F +P++F+I++ECL PLK+DLEWKL YVGS++   +DQ L+S+LVGPV VG   F+ +AD P P  I   +++ VTV++L+CSY  +EFVRVGYYVNN+YD E+LRE PP K  ID V RNILA+KPRV
Sbjct:    1 MSIVSLTGIEVLNNPAKFTDPYEFQITFECLEPLKEDLEWKLTYVGSSDSLDHDQELDSILVGPVPVGINSFLFKADAPSPELIPASELVSVTVIILSCSYNDKEFVRVGYYVNNEYDTEELRENPPAKVAIDHVVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_YEAST (Histone chaperone ASF1 OS=Saccharomyces cerevisiae GN=ASF1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.118e-45
Identity = 85/146 (58.22%), Postives = 111/146 (76.03%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  + VL+NPA F +P++FEI++ECL  LK DLEWKL YVGS+    +DQ L+S+LVGPV VG  +FV  ADPP    I   +++ VTV+LL+CSY G+EFVRVGYYVNN+YD+E+LRE PP K  +D + RNILA+KPRV
Sbjct:    1 MSIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDHIVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_KLULA (Histone chaperone ASF1 OS=Kluyveromyces lactis GN=ASF1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.051e-44
Identity = 86/146 (58.90%), Postives = 110/146 (75.34%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++  + VL+NPA F +P++FEI++ECL PLK DLEWKL YVGS+    +DQ L+S+LVGP+ VG  +F   AD P P  I   +++ VTV+LL+CSY G+EFVRVGYYVNN+YD E+LRE PP K  ID V RNILA+KPRV
Sbjct:    1 MSIVSLLGIKVLNNPAKFTDPYEFEITFECLEPLKHDLEWKLTYVGSSRSLDHDQELDSILVGPIPVGINKFKFVADAPSPDLIPASELVSVTVILLSCSYNGKEFVRVGYYVNNEYDLEELRENPPQKVPIDHVVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_DICDI (Histone chaperone asf1 OS=Dictyostelium discoideum GN=asf1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.051e-44
Identity = 76/146 (52.05%), Postives = 118/146 (80.82%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS + +T V + +NP++F +PF F+IS+EC++P+K+DLEWK+IYVGSA++E  DQ+L+S+L+GPV VG  +FV + DPPD +KI ++D++GVTV+ L C+Y G++F+RVGYYVNNDY +++L++ PP    + ++QRN++ DKP V
Sbjct:    1 MSHIRLTQVLIHNNPSSFNSPFIFDISFECVSPIKEDLEWKVIYVGSADNEKNDQVLDSILLGPVAVGQNQFVFEVDPPDANKIPKDDLLGVTVVFLICAYKGEDFIRVGYYVNNDYFEQELKDNPPETPDLSKIQRNVMDDKPVV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_YARLI (Histone chaperone ASF1 OS=Yarrowia lipolytica GN=ASF1 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44
Identity = 85/146 (58.22%), Postives = 111/146 (76.03%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++ N+ VL+NPA F +P++F+I++ECL PLK DLEWKL YVGS+    +DQ L+S+LVGPV VG  +FV  ADPP    I   +++ VTV++L+CSY  +EFVRVGYYVNN+YD E+LR  PPPK  +D V RNILA+KPRV
Sbjct:    1 MSIVSLLNIDVLNNPAPFGSPYEFQITFECLEPLKHDLEWKLTYVGSSTSFEHDQELDSLLVGPVPVGVNKFVFTADPPTVDLIPASELVSVTVIILSCSYNDREFVRVGYYVNNEYDSEELRLNPPPKVQVDHVVRNILAEKPRV 146          
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_USTMA (Histone chaperone ASF1 OS=Ustilago maydis GN=ASF1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.191e-42
Identity = 81/146 (55.48%), Postives = 111/146 (76.03%), Query Frame = 2
Query:  176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613
            MS V++ +V +L+  A+F +P+ F+I++EC++PL+DDLEW+L+YVGSA DE YDQ L++ +VGPV VG   F  +A  P PSKI  ED++GVTV+LLT SY  QEF+RVGYYVNN Y+ E+LRE PP K  + +V+R +L  KPRV
Sbjct:    1 MSIVHLQSVEILNAEASFKDPYVFKITFECISPLQDDLEWRLVYVGSAGDEKYDQELDTCMVGPVPVGVNSFEFEAAAPSPSKIPPEDLLGVTVILLTASYRDQEFIRVGYYVNNAYESEELRENPPEKVDLTQVRREVLVSKPRV 146          
The following BLAST results are available for this feature:
BLAST of DR908330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ASF1_DEBHA1.123e-4658.90Histone chaperone ASF1 OS=Debaryomyces hansenii GN... [more]
ASF1_CANGA3.267e-4658.90Histone chaperone ASF1 OS=Candida glabrata GN=ASF1... [more]
ASF1_ASPOR4.267e-4658.90Histone chaperone asf1 OS=Aspergillus oryzae GN=as... [more]
ASF1_NEUCR9.505e-4655.48Histone chaperone asf-1 OS=Neurospora crassa GN=as... [more]
ASF1_CANAL1.241e-4558.22Histone chaperone ASF1 OS=Candida albicans GN=ASF1... [more]
ASF1_YEAST2.118e-4558.22Histone chaperone ASF1 OS=Saccharomyces cerevisiae... [more]
ASF1_KLULA1.051e-4458.90Histone chaperone ASF1 OS=Kluyveromyces lactis GN=... [more]
ASF1_DICDI1.051e-4452.05Histone chaperone asf1 OS=Dictyostelium discoideum... [more]
ASF1_YARLI1.793e-4458.22Histone chaperone ASF1 OS=Yarrowia lipolytica GN=A... [more]
ASF1_USTMA2.191e-4255.48Histone chaperone ASF1 OS=Ustilago maydis GN=ASF1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16458 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-18_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908330 ID=DR908330; Name=DR908330; organism=Citrus sinensis; type=EST; length=664bp
TCAACCGTCCTTTGCACCGCCATTTCCCAGTCACCGTTTCTCCTCCTCGA
AGACTCTATTTCGCCTTTCGCCTCTAGCCTCTAGGGTTTCTGATTTCTTC
GATGAAGGATATCGAATCCAGGAATAGAGCCAATCAATCCACGGAATCAT
CAGAATCCTGTTCTAACTCAAGACTATGAGCGCCGTAAATATCACAAACG
TCACCGTTTTAGATAACCCTGCTGCGTTTCTCAATCCGTTTCAGTTCGAA
ATCTCGTACGAGTGTTTGACCCCTCTTAAAGACGACTTGGAATGGAAACT
CATTTATGTGGGATCTGCTGAGGATGAGACTTATGATCAACTGCTAGAAA
GTGTGCTTGTTGGTCCTGTTAATGTTGGTAACTACCGTTTTGTCTTACAG
GCAGACCCTCCGGACCCATCAAAAATCCGTGAAGAGGATATAATTGGTGT
CACTGTACTGCTTTTAACATGTTCTTATATAGGACAGGAATTTGTTCGAG
TGGGGTATTACGTGAACAATGATTATGATGACGAGCAGCTAAGAGAGGAG
CCTCCTCCAAAGGGTTTGATAGATAGAGTTCAAAGAAACATATTAGCTGA
CAAGCCTAGAGTCCAAAGTTCCCAATCAATTTTCATCCTGAGAACAATGA
GCATGGAGAGGACA
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