DR908327

Overview
NameDR908327
Unique NameDR908327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.807e-57
Identity = 104/180 (57.78%), Postives = 134/180 (74.44%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ NFD
Sbjct:  173 YLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFD 349          

HSP 2 Score: 38.891 bits (89), Expect = 2.807e-57
Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  348 FDLRPAGIIKMLDLRRP---IYKQTAAYGHFGRTDVDLSWE 385          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.807e-57
Identity = 104/180 (57.78%), Postives = 133/180 (73.89%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD+ GTGK+ +  ++++V+ NFD
Sbjct:  173 YLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTLGTGKVSEDVLVELVRNNFD 349          

HSP 2 Score: 40.4318 bits (93), Expect = 2.807e-57
Identity = 22/41 (53.66%), Postives = 25/41 (60.98%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I   LDL+R     + +TAAYGHFGR D D TWE
Sbjct:  348 FDLRPAGIIKMLDLRRP---IYKQTAAYGHFGRTDVDLTWE 385          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.808e-57
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + +HVI PVIP++Y DDK    +NP+GRFV+GGP  D GLTGRKII+DTY             KDPTKVDRS  Y+ R  AK++VA+GLA + ++Q+SYAIGV +P+S+ +D++GT K+ ++++LK++ E FD
Sbjct:  169 PFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEEYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSILIDTFGTAKVDEEKLLKVITEIFD 345          

HSP 2 Score: 45.0542 bits (105), Expect = 2.808e-57
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F FRPG I   L+L R     + KTAAYGHFGR++ +FTWE
Sbjct:  344 FDFRPGAIIKKLNLLRP---IYRKTAAYGHFGRNEEEFTWE 381          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.661e-57
Identity = 100/180 (55.56%), Postives = 132/180 (73.33%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGKTQVTVEY ++     PVRV +V++S QH   + +D I  D+ +HVIKP+IP+  +DDKT   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS +Y  R  AK+IVA+GLA++C VQ++YAIGV  PL + +D++GTGKI D++I +IVK+ FD
Sbjct:  170 YLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKTKIFVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLAKKCEVQLAYAIGVATPLEIGIDTFGTGKISDEKISEIVKQVFD 345          

HSP 2 Score: 37.7354 bits (86), Expect = 3.661e-57
Identity = 20/41 (48.78%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  344 FDLRPAAIIRDLDLRRP---IYRQVAAYGHFGRHDLDLPWE 381          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.661e-57
Identity = 95/181 (52.49%), Postives = 132/181 (72.93%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K Q+TV Y +E G +   R+ TV++STQHD ++  +E+   + +H+IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E+FD
Sbjct:  161 PWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPSIAYEELKNAVIEHIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFD 339          

HSP 2 Score: 41.9726 bits (97), Expect = 3.661e-57
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  338 FDLRPKGIVQMLDLLRP---IYSKSAAYGHFGREEPEFTWE 375          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.772e-57
Identity = 106/180 (58.89%), Postives = 130/180 (72.22%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGK+QVTVEY  +     PVRV TVLISTQH   V  D I  D+ +HVIKPVIP + LD KT + +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+GLAR+C VQ++YAIGV  P+SV VD++GTG IP+++I  +V + FD
Sbjct:  171 YLRPDGKSQVTVEYDGDK----PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARKCEVQLAYAIGVARPVSVRVDTFGTGIIPEEKIESLVNKYFD 346          

HSP 2 Score: 38.5058 bits (88), Expect = 4.772e-57
Identity = 21/41 (51.22%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  345 FDLRPAGIIKTLDLRRP---IYKQTAAYGHFGRTDIDLPWE 382          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.222e-57
Identity = 98/181 (54.14%), Postives = 130/181 (71.82%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            P+LRPDGKTQVT+EY  E+G   P R+ T++IS QHD   T ++I  D+  +VI  V+    +DD+T + +NP+GRFV+GGP GD GLTGRKII+DTY             KDPTKVDRSGAY  R  AK+IVA+GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E FD
Sbjct:  172 PYLRPDGKTQVTIEY--EDGR--PKRIDTIVISAQHDPDTTQEQIRKDVIDYVILDVVDRNLIDDRTRYFINPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFD 348          

HSP 2 Score: 40.0466 bits (92), Expect = 6.222e-57
Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RPG I  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  347 FDLRPGAIIRDLDLRRP---IYRQVAAYGHFGRPDLDLPWE 384          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.017e-57
Identity = 103/181 (56.91%), Postives = 137/181 (75.69%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD KTQVT+EY ++NGA+VP+RV TV++S QH   +T +E+  ++ + +IK  IP KYLD+KT++H+ PSG FVIGGP GDAGLTGRKII+DTY             KD +KVDRS AY+ R  AKS+VA+GLARR +VQ+SYAIGV EPLS++VD+YGT     +E+++I++ NFD
Sbjct:  173 PWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYHIQPSGLFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYVGRWIAKSLVAAGLARRALVQLSYAIGVAEPLSIYVDTYGTSDKTSEELVQIIRNNFD 353          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.111e-57
Identity = 99/180 (55.00%), Postives = 130/180 (72.22%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGKTQVTVEY +      PVR+ T++ISTQH    T + I  DL +HV+ PV+P + LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA+GLA RC +Q++YAIGV +P+SV V+++GT KI +++I ++VK NFD
Sbjct:  171 YLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLDESTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAERCEIQLAYAIGVAQPVSVLVETFGTAKIDEEKIGELVKNNFD 346          

HSP 2 Score: 36.965 bits (84), Expect = 8.111e-57
Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = 2
Query:  530 EGEF*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            +  F  RP  I   L+L+R     + +TAAYGHFGR D D  WE
Sbjct:  342 KNNFDLRPAGIIKTLNLRRP---IYRQTAAYGHFGRTDLDLPWE 382          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_NEIG2 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.058e-56
Identity = 94/181 (51.93%), Postives = 132/181 (72.93%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K Q+TV Y +E G +   R+ TV++STQHD  ++++E++  + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V E+FD
Sbjct:  161 PWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPPELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVCEHFD 339          

HSP 2 Score: 43.5134 bits (101), Expect = 1.058e-56
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 2
Query:  527 CEGEF*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            CE  F  RP  I   LDL R   G   K+AAYGHFGR++P+FTWE
Sbjct:  335 CE-HFDLRPKGIVQMLDLLRPIYG---KSAAYGHFGREEPEFTWE 375          
The following BLAST results are available for this feature:
BLAST of DR908327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACC22.807e-5757.78S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACWK2.807e-5757.78S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_THENN2.808e-5751.93S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK_THEP33.661e-5755.56S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_NEIMB3.661e-5752.49S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_CLOTH4.772e-5758.89S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_SYMTH6.222e-5754.14S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_NEUCR7.017e-5756.91S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK_DESHD8.111e-5755.00S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_NEIG21.058e-5651.93S-adenosylmethionine synthetase OS=Neisseria gonor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16455 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908327 ID=DR908327; Name=DR908327; organism=Citrus sinensis; type=EST; length=665bp
GTCCGTGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAGTATTAC
AATGAGAATGGCGCCATGGTTCCTGTTCGTGTCCATACTGTGCTCATCTC
AACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAGATCTCA
AGCAACATGTGATCAAGCCTGTGATTCCTGACAAGTACTTGGATGACAAA
ACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCA
CGGTGATGCTGGGCTCACCGGCCGGAAGATTATTATTGATACTTATGGTG
GCTGGGGGGCACACGGTGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAG
GTTGATAGAAGCGGTGCTTACATTGTAAGGCAAGCTGCTAAGAGTATTGT
GGCAAGCGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACGCTATTG
GTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACTGGGAAG
ATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGATTTAGG
CCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCAACGGCAG
GTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGATCCTGATT
TCACTTGGGAGATTG
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