DR908327

Overview
NameDR908327
Unique NameDR908327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_ECO55 (S-adenosylmethionine synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=metK PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.683e-48
Identity = 90/181 (49.72%), Postives = 124/181 (68.51%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD
Sbjct:  159 PWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFD 335          

HSP 2 Score: 28.4906 bits (62), Expect = 2.683e-48
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  602 FLKTAAYGHFGRDDPDFTWE 661
            + +TAAYGHFGR+   F WE
Sbjct:  352 YKETAAYGHFGRE--HFPWE 369          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_ECO27 (S-adenosylmethionine synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.683e-48
Identity = 90/181 (49.72%), Postives = 124/181 (68.51%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD
Sbjct:  159 PWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFD 335          

HSP 2 Score: 28.4906 bits (62), Expect = 2.683e-48
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  602 FLKTAAYGHFGRDDPDFTWE 661
            + +TAAYGHFGR+   F WE
Sbjct:  352 YKETAAYGHFGRE--HFPWE 369          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.683e-48
Identity = 90/181 (49.72%), Postives = 124/181 (68.51%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD
Sbjct:  159 PWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFD 335          

HSP 2 Score: 28.4906 bits (62), Expect = 2.683e-48
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  602 FLKTAAYGHFGRDDPDFTWE 661
            + +TAAYGHFGR+   F WE
Sbjct:  352 YKETAAYGHFGRE--HFPWE 369          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_HAEDU (S-adenosylmethionine synthetase OS=Haemophilus ducreyi GN=metK PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.683e-48
Identity = 88/180 (48.89%), Postives = 121/180 (67.22%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            WLRPD K+Q+T  Y N       + +  V++STQH E V   E+   + + +IKP +P K+L+  T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AKSIVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ +  ++K++ +NFD
Sbjct:  165 WLRPDAKSQLTFAYENNQ----IIGIDAVVLSTQHAEEVKQKELIEGVMEEIIKPTLPSKWLNQHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKSIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNDTLVKLIYQNFD 340          

HSP 2 Score: 28.8758 bits (63), Expect = 2.683e-48
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  602 FLKTAAYGHFGRDDPDFTWE 661
            + +TAAYGHFGR+   F WE
Sbjct:  357 YRETAAYGHFGRE--QFPWE 374          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_PSYIN (S-adenosylmethionine synthetase OS=Psychromonas ingrahamii (strain 37) GN=metK PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.683e-48
Identity = 89/181 (49.17%), Postives = 127/181 (70.17%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K+QVT  Y  ++G +V +    V++STQH E +  +++   + + +IKPV+P ++L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+    I+++++E+FD
Sbjct:  159 PWLRPDAKSQVTFAY--DHGKIVGI--DAVVLSTQHSEDIKQEDLVEAVMEEIIKPVLPAEWLSERTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTEKVKKDLIIQLIREHFD 335          

HSP 2 Score: 28.8758 bits (63), Expect = 2.683e-48
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  602 FLKTAAYGHFGRDDPDFTWE 661
            +  TAAYGHFGR+  +F WE
Sbjct:  352 YQSTAAYGHFGRN--EFPWE 369          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.495e-48
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTN--------DEIAADLKQHVIKPVIPDKYLD---DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +L PDGKTQV+V Y N      P+ + T++ISTQH   + +        + I  DL ++V+KP   D  L    +KT F +NP+G+FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKSIVA+ LA+R  VQ+SYAIGV  P+S+ V++YG+GK+ ++E+ K+VK++FD
Sbjct:  167 YLLPDGKTQVSVIYENNE----PIAIDTIVISTQHTSEIDDLSSEADIRERITKDLWEYVVKPATSDLKLQPNQEKTRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSIVAAKLAKRVEVQLSYAIGVANPVSILVEAYGSGKMSNQELTKVVKKHFD 353          

HSP 2 Score: 37.7354 bits (86), Expect = 3.495e-48
Identity = 22/45 (48.89%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKR---GGNGRFLK-TAAYGHFGRDDPDFTWE 661
            F  RPG I    +LK      +GRF + TAAYGHFGR D +  WE
Sbjct:  352 FDLRPGAIIEQFNLKNLPSKRSGRFYRDTAAYGHFGRPDLNLPWE 396          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_DEHE1 (S-adenosylmethionine synthetase OS=Dehalococcoides ethenogenes (strain 195) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.495e-48
Identity = 86/180 (47.78%), Postives = 123/180 (68.33%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +LRPDGK+QVTVEY+N        R+ +V+I  QHD  VT ++I AD+ + VIKP+IP   LD+ T +++N +GRFV+GGP  D G TGRKI++DTY             KDPTKVDRS  Y+ R  AK++VA+GLA R  +QV+Y IGV  PLSV ++++ T ++  ++IL I++++FD
Sbjct:  176 YLRPDGKSQVTVEYHNGEAK----RISSVVIGAQHDPDVTTEKIQADIIREVIKPIIPTNLLDENTEYYVNATGRFVVGGPVSDTGFTGRKILVDTYGGFARHGGGAFSGKDPTKVDRSACYMARYIAKNLVAAGLADRLEIQVAYVIGVAHPLSVSIETFNTARMSHEDILSIIQKHFD 351          

HSP 2 Score: 34.2686 bits (77), Expect = 3.495e-48
Identity = 19/41 (46.34%), Postives = 23/41 (56.10%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F  RP  I  NL L+R     + +TAAYGH GR + D  WE
Sbjct:  350 FDLRPEAIIRNLGLRRP---IYRQTAAYGHLGRPELDLPWE 387          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_WOLSU (S-adenosylmethionine synthetase OS=Wolinella succinogenes GN=metK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.497e-48
Identity = 84/180 (46.67%), Postives = 122/180 (67.78%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENF 542
            P+LRPDGK+QVTV Y +      PV + T+++STQH   V+ + +   + + ++  V+P +YL D   F +NP+G+FVIGGP GDAGLTGRKII+D+Y             KDP+KVDRSGAY  R  AK++VASG+  +  +Q++YAIGV EP+S+ VD++GTGK+ D ++   V++ F
Sbjct:  159 PFLRPDGKSQVTVRYVDGK----PVGIDTIVVSTQHAPDVSQERLRDAVIEEIVYKVLPKEYLGDDIRFFVNPTGKFVIGGPQGDAGLTGRKIIVDSYGGSCPHGGGAFSGKDPSKVDRSGAYAARYVAKNLVASGVCDKATIQIAYAIGVVEPVSILVDTHGTGKVEDDQLETCVRQLF 334          

HSP 2 Score: 37.3502 bits (85), Expect = 3.497e-48
Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 661
            F   P  I  +LDL R     + KTA+YGHFGR+ P+F+WE
Sbjct:  334 FRLTPKGIIESLDLLRP---IYKKTASYGHFGRELPEFSWE 371          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_SYNPX (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH8102) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.554e-48
Identity = 95/191 (49.74%), Postives = 124/191 (64.92%), Query Frame = 3
Query:    6 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKQHVIKPVIPDKYLD---DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I  DL  HV++P   D  L    + T + +NP+G+FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK +VASGLA R  VQ+SYAIGV +P+S+ V+S+GTGK+ + E+ ++V+E+FD
Sbjct:  167 YLLPDGKTQVSVVYENDK----PVAIDTILISTQHTAEVAGISDEQGIRERITEDLWTHVVEPATADLALKPSREATKYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKCLVASGLAERAEVQLSYAIGVAKPVSILVESFGTGKVSNAELTELVQEHFD 353          

HSP 2 Score: 35.4242 bits (80), Expect = 4.554e-48
Identity = 24/47 (51.06%), Postives = 27/47 (57.45%), Query Frame = 2
Query:  539 F*FRPGMISI-----NLDLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 661
            F  RPG I       NL  +RGG  RF + TAAYGHFGR+D    WE
Sbjct:  352 FDLRPGAIIETFGLRNLPQQRGG--RFYQDTAAYGHFGRNDLKAPWE 396          
BLAST of DR908327 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.557e-48
Identity = 91/181 (50.28%), Postives = 124/181 (68.51%), Query Frame = 3
Query:    3 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 545
            PWLRPD K+QVT  Y  ENG +V +    V++STQHD  VT  ++   + + ++K  +P + L   T FH+NP+G+FVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV +P S+ ++++GTGKI D +I+ +V+ +FD
Sbjct:  160 PWLRPDAKSQVTCRY--ENGKVVGI--DAVVLSTQHDPDVTQADLKEAVMELIVKHTLPAELLHKDTQFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAEKCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHFD 336          

HSP 2 Score: 30.0314 bits (66), Expect = 4.557e-48
Identity = 18/39 (46.15%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  539 F*FRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFT 655
            F  RP  I+  LDL    +  +  TAAYGHFGRD  + T
Sbjct:  335 FDLRPYAITNMLDLL---HPMYRATAAYGHFGRDPYEMT 370          
The following BLAST results are available for this feature:
BLAST of DR908327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECO552.683e-4849.72S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO272.683e-4849.72S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO242.683e-4849.72S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_HAEDU2.683e-4848.89S-adenosylmethionine synthetase OS=Haemophilus duc... [more]
METK_PSYIN2.683e-4849.17S-adenosylmethionine synthetase OS=Psychromonas in... [more]
METK_PROM43.495e-4848.69S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_DEHE13.495e-4847.78S-adenosylmethionine synthetase OS=Dehalococcoides... [more]
METK_WOLSU3.497e-4846.67S-adenosylmethionine synthetase OS=Wolinella succi... [more]
METK_SYNPX4.554e-4849.74S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_MARAV4.557e-4850.28S-adenosylmethionine synthetase OS=Marinobacter aq... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16455 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908327 ID=DR908327; Name=DR908327; organism=Citrus sinensis; type=EST; length=665bp
GTCCGTGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAGTATTAC
AATGAGAATGGCGCCATGGTTCCTGTTCGTGTCCATACTGTGCTCATCTC
AACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAGATCTCA
AGCAACATGTGATCAAGCCTGTGATTCCTGACAAGTACTTGGATGACAAA
ACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCA
CGGTGATGCTGGGCTCACCGGCCGGAAGATTATTATTGATACTTATGGTG
GCTGGGGGGCACACGGTGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAG
GTTGATAGAAGCGGTGCTTACATTGTAAGGCAAGCTGCTAAGAGTATTGT
GGCAAGCGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACGCTATTG
GTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACTGGGAAG
ATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGATTTAGG
CCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCAACGGCAG
GTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGATCCTGATT
TCACTTGGGAGATTG
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