DR908274
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_STAA9 (Thymidylate synthase OS=Staphylococcus aureus (strain JH9) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.551e-40 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
++ GDLG VYG QWR++ D G FDQL VI +IK+NP+ RR ++SAWNP+++ MALPPCH QFY+ +G+LSCQ+YQRSAD+
Sbjct: 140 KQFGDLGNVYGKQWRDW--------VDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADI 225 HSP 2 Score: 77.411 bits (189), Expect = 9.551e-40 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT +IA C L G+F+H GDAH+Y NH+ ++ QL + P LKIN +K I
Sbjct: 227 LGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSI 293
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_STAA8 (Thymidylate synthase OS=Staphylococcus aureus (strain NCTC 8325) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.551e-40 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
++ GDLG VYG QWR++ D G FDQL VI +IK+NP+ RR ++SAWNP+++ MALPPCH QFY+ +G+LSCQ+YQRSAD+
Sbjct: 140 KQFGDLGNVYGKQWRDW--------VDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADI 225 HSP 2 Score: 77.411 bits (189), Expect = 9.551e-40 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT +IA C L G+F+H GDAH+Y NH+ ++ QL + P LKIN +K I
Sbjct: 227 LGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSI 293
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_STAA3 (Thymidylate synthase OS=Staphylococcus aureus (strain USA300) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.551e-40 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
++ GDLG VYG QWR++ D G FDQL VI +IK+NP+ RR ++SAWNP+++ MALPPCH QFY+ +G+LSCQ+YQRSAD+
Sbjct: 140 KQFGDLGNVYGKQWRDW--------VDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADI 225 HSP 2 Score: 77.411 bits (189), Expect = 9.551e-40 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT +IA C L G+F+H GDAH+Y NH+ ++ QL + P LKIN +K I
Sbjct: 227 LGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSI 293
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_STAA2 (Thymidylate synthase OS=Staphylococcus aureus (strain JH1) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.551e-40 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
++ GDLG VYG QWR++ D G FDQL VI +IK+NP+ RR ++SAWNP+++ MALPPCH QFY+ +G+LSCQ+YQRSAD+
Sbjct: 140 KQFGDLGNVYGKQWRDW--------VDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADI 225 HSP 2 Score: 77.411 bits (189), Expect = 9.551e-40 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT +IA C L G+F+H GDAH+Y NH+ ++ QL + P LKIN +K I
Sbjct: 227 LGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSI 293
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_STAA1 (Thymidylate synthase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.551e-40 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
++ GDLG VYG QWR++ D G FDQL VI +IK+NP+ RR ++SAWNP+++ MALPPCH QFY+ +G+LSCQ+YQRSAD+
Sbjct: 140 KQFGDLGNVYGKQWRDW--------VDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADI 225 HSP 2 Score: 77.411 bits (189), Expect = 9.551e-40 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT +IA C L G+F+H GDAH+Y NH+ ++ QL + P LKIN +K I
Sbjct: 227 LGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSI 293
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_CAUCR (Thymidylate synthase OS=Caulobacter crescentus GN=thyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.569e-40 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 3
Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
E GDLGPVYG QWR++ A G+ DQ+ ++ +K NPN RR +++AWNP+D+ MALPPCH QF++A+G+LSCQ+YQRSAD+
Sbjct: 102 ENGDLGPVYGKQWRSW--------ATPDGRVIDQISALVENLKANPNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADV 186 HSP 2 Score: 80.1073 bits (196), Expect = 9.569e-40 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540
LGVPFNIASYALLT M+A V L PG+F+H GDAH+Y NH+ EQL + P FP +KI ++ +
Sbjct: 188 LGVPFNIASYALLTLMVAKVVGLEPGEFVHTFGDAHLYLNHLDQAREQLTREPFDFPTMKIADKRDL 254
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_BACA2 (Thymidylate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=thyA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 9.578e-40 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 3
Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
E G+LGPVYG QWR++ G+ DQ+ +I+ IK NPN RR+++SAWN ++ MALPPCH QFY+A+G+LSCQ+YQRSAD+
Sbjct: 86 ENGELGPVYGSQWRSWRGA--------DGETIDQISRLIHDIKTNPNSRRLIVSAWNVGEIDHMALPPCHCLFQFYVADGKLSCQLYQRSADV 170 HSP 2 Score: 79.7221 bits (195), Expect = 9.578e-40 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILK 519
LGVPFNIASYALLT MIAHV L PG+F+H GD H+Y+NHV + QL + +P P L+
Sbjct: 172 LGVPFNIASYALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLR 231
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_BARQU (Thymidylate synthase OS=Bartonella quintana GN=thyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.578e-40 Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 3
Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
E+G+LGP+YG+QWR++ A G+ DQ+ ++ IK P+ RR+++SAWNP+ ++ MALPPCH F QFY+A+ +LSCQ+YQRSAD+
Sbjct: 86 EKGNLGPIYGYQWRSWPAS--------DGRYIDQISRLLTMIKKTPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADI 170 HSP 2 Score: 80.8777 bits (198), Expect = 9.578e-40 Identity = 38/63 (60.32%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINP 528
LGVPFNIASYALLT MIA V L GDFIH +GDAH+Y NH QL ++P P + INP
Sbjct: 172 LGVPFNIASYALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINP 234
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LACDB (Thymidylate synthase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=thyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.112e-39 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 63 GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
G+LG VYG QWR++G R G DQ+ DVI +IK NP+ RR++++AWNP D+ ALPPCH+ QFY+A+G+LS Q+YQRS DM
Sbjct: 142 GNLGDVYGAQWRHWGKR--------DGGFIDQIADVIEQIKTNPDSRRLIVTAWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDM 224 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-39 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK 537
LGVPFNIASY+LL +IA L G+F+H IGDAH+Y+NH +EEQL++ P P L +NP KK
Sbjct: 226 LGVPFNIASYSLLLSLIARETGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKK 291
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LACDA (Thymidylate synthase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=thyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.112e-39 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 63 GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335
G+LG VYG QWR++G R G DQ+ DVI +IK NP+ RR++++AWNP D+ ALPPCH+ QFY+A+G+LS Q+YQRS DM
Sbjct: 142 GNLGDVYGAQWRHWGKR--------DGGFIDQIADVIEQIKTNPDSRRLIVTAWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDM 224 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-39 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK 537
LGVPFNIASY+LL +IA L G+F+H IGDAH+Y+NH +EEQL++ P P L +NP KK
Sbjct: 226 LGVPFNIASYSLLLSLIARETGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKK 291 The following BLAST results are available for this feature:
BLAST of DR908274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 394
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908274 ID=DR908274; Name=DR908274; organism=Citrus sinensis; type=EST; length=675bpback to top |