DR908274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_DICNV (Thymidylate synthase OS=Dichelobacter nodosus (strain VCS1703A) GN=thyA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.119e-39 Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 3 Query: 9 GNASREYLDSVGLTDREE-----GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 GN + YL+ G++ +E GDLGP+YG QWRN+ R DQ+ V+ +K NP+ RR+++S+WN + L+ MALPPCH+ QFY+ANG LSCQ+YQRSAD+ Sbjct: 65 GNTNIAYLNQNGVSIWDEWADKNGDLGPIYGKQWRNWAGR-------------DQIHQVLTSLKTNPDSRRMLVSSWNVAQLEEMALPPCHVLFQFYVANGRLSCQLYQRSADV 165 HSP 2 Score: 75.485 bits (184), Expect = 2.119e-39 Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKI 540 LGVPFNIASYALLT M+A DL GDF+ GD H+YRNH +EQL++ P P P + I K I Sbjct: 167 LGVPFNIASYALLTMMMAQQADLELGDFVWTGGDVHLYRNHFAQAQEQLKRQPYPLPKMHIKRAKSI 233
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_PHYMT (Thymidylate synthase OS=Phytoplasma mali (strain AT) GN=thyA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.756e-39 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 21 REYLDSVGLTDRE---EGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 +E++D + + ++ GDLGP+YG QWRNF QG DQL D+I++IK NP+ RR++L+AW+P+ +K M LPPCH+ Q Y+ ++S Q+YQRS D+ Sbjct: 100 QEFIDKIIIDEKFAKIHGDLGPIYGHQWRNF-------------QGIDQLTDLISEIKKNPHSRRLILTAWDPTVIKDMLLPPCHVMIQCYVEKNKISMQLYQRSGDV 194 HSP 2 Score: 81.6481 bits (200), Expect = 2.756e-39 Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINP 528 LG+PFNIASY+LL +IA L P +FIH IGDAH+Y NH+ +++Q++++PK PI+ +NP Sbjct: 196 LGIPFNIASYSLLLIIIAQCTGLKPFEFIHTIGDAHIYNNHIEQIQKQIKRIPKKLPIMTLNP 258
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY2_BACSU (Thymidylate synthase 2 OS=Bacillus subtilis GN=thyA2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.760e-39 Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 E G+LGPVYG QWR++ G+ DQ+ +I IK NPN RR+++SAWN ++ MALPPCH QFY+++G+LSCQ+YQRSAD+ Sbjct: 86 ENGELGPVYGSQWRSWRGA--------DGETIDQISRLIEDIKTNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADV 170 HSP 2 Score: 79.337 bits (194), Expect = 2.760e-39 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILK 519 LGVPFNIASYALLT +IAHV L PG+FIH GD H+Y+NH+ + QL++ +P P L+ Sbjct: 172 LGVPFNIASYALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLR 231
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LACSS (Thymidylate synthase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=thyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.586e-39 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 54 REEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 ++ G+LG +YG QWR + R SG+ DQ+ +VI IK NP+ RR+++SAWNP D+ MALPPCH QFY+ +G+LSCQ+YQRS D+ Sbjct: 137 KQYGELGDIYGKQWRAWQTR--------SGETIDQIKNVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDV 222 HSP 2 Score: 78.9518 bits (193), Expect = 3.586e-39 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK 537 LGVPFNIASYALLT +IAH L G+FIH +GDAH+Y NHV ++ QL + P L +NP+KK Sbjct: 224 LGVPFNIASYALLTHLIAHETGLEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKK 289
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_SACD2 (Thymidylate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=thyA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.593e-39 Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 9 GNASREYLDSVGLT-----DREEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLK-------------LMALPPCHMFAQFYMANGELSCQMYQRSADM 335 G + +YL G+ EEGDLGPVYG QWR++ G DQ ++ +IKN P+ RR ++SAWNP+ L MALPPCH QFY+A+ +LSCQ+YQRSAD+ Sbjct: 65 GETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTP--------DGGSLDQFALLVEQIKNKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRSADI 183 HSP 2 Score: 88.1965 bits (217), Expect = 3.593e-39 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK 537 LGVPFNIASYALLT M+A V L GDF+H GDAH+Y NH+ +E QL + P P P +KINPE K Sbjct: 185 LGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPLPTMKINPEVK 250
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_THISH (Thymidylate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=thyA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.681e-39 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLK-------------LMALPPCHMFAQFYMANGELSCQMYQRSADM 335 E+G+LGPVYG QWR + G+ DQ+ V+ +I+ P+ RR+++SAWN ++L MAL PCH F QFY+A+G LSCQ+YQRSAD+ Sbjct: 86 EDGELGPVYGRQWRAWPTP--------DGRHIDQISQVVEQIRTRPDSRRLIVSAWNVAELPDEGISPKDNARAGRMALAPCHTFFQFYVADGRLSCQLYQRSADV 183 HSP 2 Score: 91.2781 bits (225), Expect = 4.681e-39 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK 537 LGVPFNIASYALLT M+A V DL PGDF+H GD H+Y NHV +EQL + P P P + +NPE K Sbjct: 185 LGVPFNIASYALLTLMVAQVTDLEPGDFVHTFGDVHLYSNHVEQAKEQLSREPYPLPKMHLNPEVK 250
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_XANC5 (Thymidylate synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=thyA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.104e-39 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 57 EEGDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 + GDLGPVYG QWR R+T G DQ+ ++++IK NP+ RR+V+SAWN +L MAL PCH QFY+ NG+LSCQ+YQRS D+ Sbjct: 86 DNGDLGPVYGKQWR----RWTGP----DGVEIDQMQWLVDEIKRNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDI 170 HSP 2 Score: 83.5741 bits (205), Expect = 6.104e-39 Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPE 531 LGVPFNIASYALLT M+A L GDF+H +GDAH+Y NH EQL + P+ P L++NPE Sbjct: 172 LGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPE 235
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LISW6 (Thymidylate synthase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=thyA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.931e-39 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 63 GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 G+LG +YG QWR + G+ DQL DVI IK NPN RR+++SAWNP D+ MALPPCH QFY+A+G+LSCQ+YQRSAD+ Sbjct: 138 GELGNIYGKQWREWKTS--------QGETIDQLADVIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADI 220 HSP 2 Score: 73.1738 bits (178), Expect = 7.931e-39 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKIN 525 LGVPFNIASYALLT +IA L G+FIH +GDAH+Y NH+ ++EQL + P P L ++ Sbjct: 222 LGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLS 283
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LISMH (Thymidylate synthase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.346e-38 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 63 GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 G+LG +YG QWR + G+ DQL D+I IK NPN RR+++SAWNP D+ MALPPCH QFY+A+G+LSCQ+YQRSAD+ Sbjct: 138 GELGNIYGKQWREWKTS--------QGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADI 220 HSP 2 Score: 73.559 bits (179), Expect = 1.346e-38 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKIN 525 LGVPFNIASYALLT +IA L G+FIH +GDAH+Y NH+ ++EQL + P P L ++ Sbjct: 222 LGVPFNIASYALLTHLIAREVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLS 283
BLAST of DR908274 vs. ExPASy Swiss-Prot
Match: TYSY_LISMF (Thymidylate synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=thyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.346e-38 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 63 GDLGPVYGFQWRNFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADM 335 G+LG +YG QWR + G+ DQL D+I IK NPN RR+++SAWNP D+ MALPPCH QFY+A+G+LSCQ+YQRSAD+ Sbjct: 138 GELGNIYGKQWREWKTS--------QGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADI 220 HSP 2 Score: 73.559 bits (179), Expect = 1.346e-38 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 340 LGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKIN 525 LGVPFNIASYALLT +IA L G+FIH +GDAH+Y NH+ ++EQL + P P L ++ Sbjct: 222 LGVPFNIASYALLTHLIAREVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLS 283 The following BLAST results are available for this feature:
BLAST of DR908274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 394
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908274 ID=DR908274; Name=DR908274; organism=Citrus sinensis; type=EST; length=675bpback to top |