DR908248

Overview
NameDR908248
Unique NameDR908248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28
Identity = 67/207 (32.37%), Postives = 111/207 (53.62%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRND-RGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 606
            +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L T+  TR YVK  ++ QD FF+ F+  +  L +
Sbjct:  101 VDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGD 302          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.877e-28
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAI 591
            I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P    ++  +L  F   G+D   LVALLGSH++G + C+    RLY      + D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++
Sbjct:  119 IDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSM 317          

HSP 2 Score: 24.2534 bits (51), Expect = 2.877e-28
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTGT GEIRR
Sbjct:  325 PLTGTDGEIRR 335          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.882e-28
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 606
            I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + +
Sbjct:  108 IDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGD 305          

HSP 2 Score: 21.9422 bits (45), Expect = 4.882e-28
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTG+ GEIR+
Sbjct:  308 PLTGSSGEIRK 318          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28
Identity = 74/216 (34.26%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTLSQVQRVR 636
            IE+ K  +E+ CP  VSCAD++ ++ RD V   GGPY  +  GR+DG  SRA      LP    ++S +++ FAA G+    +V L G H++G +HC     RL     + ++DP++N      +  KCP      K    V +   T  V DN YY+ IL  KG+   D  L  D RT+  V+  A+ Q  FF+EF+ ++  L    + +  +VR
Sbjct:  103 IEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRN-LPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLD--STSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKLGNFGVKETGQVR 315          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 70/208 (33.65%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTL 615
            I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE  +
Sbjct:  101 ITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNV 306          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27
Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS 603
            I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C    +RL+       DP ++P  +  +  +CP    +      V  D G+    D +YY N+   +G++  D  L TD  TRP V+++   +  F  EF+R++  +S
Sbjct:  109 IDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCPQ---NGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMS 308          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.376e-27
Identity = 67/202 (33.17%), Postives = 110/202 (54.46%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY +      D  L      ++  +CP +  D         D  +    DN+Y++N+++NKGL+  D  L ++++++R  VKK A+ Q  FF++F+ ++
Sbjct:  108 VDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVL---DIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESM 306          

HSP 2 Score: 21.9422 bits (45), Expect = 2.376e-27
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTG+ GEIR+
Sbjct:  314 PLTGSSGEIRK 324          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 73/226 (32.30%), Postives = 121/226 (53.54%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTLSQVQRVRSEGLQSCQQ 663
            IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++  +++    +S +   + E  + C++
Sbjct:  111 IEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAK--SMVKMGNISPLTGAKGEIRRICRR 331          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 69/197 (35.03%), Postives = 104/197 (52.79%), Query Frame = 1
Query:   16 KEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY        DP+L+   +  +   CP +      V  +  D  TP V DN Y+  +  N GL+  D  L  D RT+P   +MA+ +  F K F  A+
Sbjct:  127 KALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVV--LPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAM 321          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.617e-27
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 1
Query:    1 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHM-LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK-MAKSQDYFFKEFSRAI 591
            +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L T+  T   + + +  S   FF EF++++
Sbjct:  101 FIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSM 301          
The following BLAST results are available for this feature:
BLAST of DR908248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PER17_ARATH1.468e-2832.37Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER36_ARATH2.877e-2835.15Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER52_ARATH4.882e-2834.33Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER66_ARATH5.580e-2834.26Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER6_ARATH1.243e-2733.65Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER71_ARATH2.120e-2735.29Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER49_ARATH2.376e-2733.17Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER72_ARATH2.769e-2732.30Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER19_ARATH2.769e-2735.03Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER3_ARATH3.617e-2735.78Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16376 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908248 ID=DR908248; Name=DR908248; organism=Citrus sinensis; type=EST; length=684bp
TACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGT
TTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGC
TTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAA
AGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGACAGCAT
GTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGAC
TTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAG
CTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCA
TGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGG
CTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAAC
AACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCA
TCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCA
AGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTT
TCTGAGAACACCCTCTCACAGGTACAAAGGGTGAGATCCGAAGGTTTGCA
ATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
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