DR908248

Overview
NameDR908248
Unique NameDR908248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26
Identity = 76/228 (33.33%), Postives = 119/228 (52.19%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTLSQVQRVRSEGLQSCQ 660
            I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY      +  P +N   +  M  +CP        DP  + Y+  D G+     +++Y  IL NK ++ VD QL  +  T+   K+ ++  + F K F  A+++     ++ + +   E  + C+
Sbjct:  111 IDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDP--LVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSF--ALSMSKMGAINVLTKTEGEIRKDCR 332          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.957e-26
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAIT 594
            I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N   V  + + CP        DP  + Y+  D G+     ++YY  +L +  ++ VD +L  +  ++   ++ A   + F K F+ A++
Sbjct:  111 IDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDP--LVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMS 312          

HSP 2 Score: 21.557 bits (44), Expect = 1.957e-26
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  615 LTGTKGEIRR 644
            LTGT GEIRR
Sbjct:  320 LTGTAGEIRR 329          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.963e-26
Identity = 67/201 (33.33%), Postives = 106/201 (52.74%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 606
            I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L     T   V+  + S   F  +F+ A+  + +
Sbjct:   80 INDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGD 277          

HSP 2 Score: 21.9422 bits (45), Expect = 1.963e-26
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTG+ GEIR+
Sbjct:  280 PLTGSSGEIRK 290          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.344e-26
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 1
Query:   16 KEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL 600
            KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG  S A  +   LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L
Sbjct:  110 KEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKL 308          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.344e-26
Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 606
            I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE
Sbjct:  106 IDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSE 302          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.344e-26
Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 606
            I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE
Sbjct:  106 IDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSE 302          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1
Query:    1 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY--------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAI 591
            ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   ++  +  KC     +   V+    D G+    D  Y++N+   +GL   D +L T+  TR YV++ A    +D FF +F+ ++
Sbjct:  100 FVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEM---DPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASM 302          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.999e-26
Identity = 71/208 (34.13%), Postives = 108/208 (51.92%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRN-DRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLL 600
            ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A  LV L G H++G + C  +  RLY      + DP++NP +V  +  KCP     P   +   N D G+ +  D +Y++ +   KGL   D  L  D  T+ YV+  A     F    K+FS ++  L
Sbjct:  102 VDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP-----PTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKL 304          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.318e-26
Identity = 66/202 (32.67%), Postives = 109/202 (53.96%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++
Sbjct:  113 VDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESM 311          

HSP 2 Score: 21.9422 bits (45), Expect = 4.318e-26
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTG+ GEIR+
Sbjct:  319 PLTGSSGEIRK 329          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 69/205 (33.66%), Postives = 108/205 (52.68%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAI 591
            I+ +K AVE+ CP  VSCAD+L ++ +  VV  GGP   + +GRRD  +   ++    LP  + ++ V+ ++F  +G+D P  LVAL G H+ G+  C  ++ RLY      + DP L+  ++  +  +CP    +      V  D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F  A+
Sbjct:  104 IDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP---RNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAM 305          
The following BLAST results are available for this feature:
BLAST of DR908248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PER26_ARATH1.795e-2633.33Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER61_ARATH1.957e-2634.47Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PERP7_BRARA1.963e-2633.33Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER50_ARATH2.344e-2635.64Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER2_ZINEL2.344e-2635.82Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL2.344e-2635.82Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER1_ORYSJ3.062e-2633.82Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_ARATH3.999e-2634.13Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER14_ARATH4.318e-2632.67Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER2_ARMRU6.821e-2633.66Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16376 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908248 ID=DR908248; Name=DR908248; organism=Citrus sinensis; type=EST; length=684bp
TACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGT
TTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGC
TTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAA
AGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGACAGCAT
GTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGAC
TTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAG
CTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCA
TGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGG
CTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAAC
AACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCA
TCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCA
AGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTT
TCTGAGAACACCCTCTCACAGGTACAAAGGGTGAGATCCGAAGGTTTGCA
ATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
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