DR908248

Overview
NameDR908248
Unique NameDR908248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22
Identity = 67/221 (30.32%), Postives = 114/221 (51.58%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTLSQVQRVRSEGLQSCQQ 663
            I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + +  +S +     +  Q+C++
Sbjct:   99 IDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGD--ISPLTGSNGQIRQNCRR 314          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.671e-22
Identity = 64/198 (32.32%), Postives = 101/198 (51.01%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS-RAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            I+  K  VE+ CPG+VSCADI+ ++ RD    +GGP   +K GRRD   + +A      LP   D++  +   F+  G++   LVAL G+H++G++ C     RLY E    ++         +CP    D         D  TP   DNNYY+N++  KGL++ D  L  +   T   V + +K++  F  +F+ A+
Sbjct:  104 IDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCPTVGGDGNLAAL---DLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAM 297          

HSP 2 Score: 21.9422 bits (45), Expect = 5.671e-22
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  612 PLTGTKGEIRR 644
            PLTG+ GEIR+
Sbjct:  305 PLTGSNGEIRK 315          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.673e-22
Identity = 66/196 (33.67%), Postives = 94/196 (47.96%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+
Sbjct:  102 IDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAM 292          

HSP 2 Score: 21.557 bits (44), Expect = 5.673e-22
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  612 PLTGTKGEIR 641
            PLTGT G+IR
Sbjct:  300 PLTGTSGQIR 309          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.673e-22
Identity = 64/196 (32.65%), Postives = 95/196 (48.47%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+
Sbjct:   98 VDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAM 290          

HSP 2 Score: 21.9422 bits (45), Expect = 5.673e-22
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  612 PLTGTKGEIR 641
            PLTGT+G+IR
Sbjct:  298 PLTGTQGQIR 307          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 72/210 (34.29%), Postives = 105/210 (50.00%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP-DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSE 606
            IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DGR S A      LP   DS++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +CP +  P  + V     D G+    D +Y  N+ + +GL+  D  L T+  TRP V+++   +  F     EF+R++T +S+
Sbjct:  108 IEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVL----DTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQ 311          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 69/227 (30.40%), Postives = 111/227 (48.90%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENTLSQVQRVRSEGLQSCQ 660
            I+ +K ++ER CP  VSCAD+L ++ +  V+  GGP+ P+  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H+ GR  C  +  RLY        DP L+P ++  +   CP    +      V  D  TP   D  YY N+ + KGL+  D +L       T P V   + +   FF  F  A  ++    L  +   + E  Q+C+
Sbjct:  109 IDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQ---NGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDA--MIRMGNLRPLTGTQGEIRQNCR 330          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 67/201 (33.33%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAI 591
            I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+         DP+++P     + + C  A+P   A    ++   TP+  DN ++  I + KG++++D  +A+D  T   V + A + + F ++F+ A+
Sbjct:  100 IDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTC--AVPGGFAA-LDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAM 297          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 67/206 (32.52%), Postives = 101/206 (49.03%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGV-VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS 603
            I+ IK  +E+ CP  VSCADIL L+ RD V      P   + TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D          V  D   P+  D+ Y+ ++L NKGL   D  L TD  +  ++  + ++   F  +F R++  +S
Sbjct:  124 IDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP-SAAHIASVFQNSGAFLAQFGRSMIKMS 328          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 66/230 (28.70%), Postives = 115/230 (50.00%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPH-------MLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM---AKSQDYFFKEFSRAITLLSENTLSQVQRVRSEGLQSCQ 660
            I+ IK  +E  CP  VSC+DIL L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+  P ++     D           +  +C D+  D +       D  TP   DN+Y+ N+L+ +GL++ D+ L ++       +K+   A +QD FF +F    ++L    ++ +  +  E  ++C+
Sbjct:  108 IDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPL---DIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVE--SMLKMGNINVLTGIEGEIRENCR 332          
BLAST of DR908248 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 64/201 (31.84%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    4 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTR----PYVKKMAKSQDYFFKEFSRAI 591
            I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP           +  D  +  V DN  ++NI + +G+++ D  L  D   +     Y++    S+  F  +F++A+
Sbjct:  100 IDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQG---GDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAM 295          
The following BLAST results are available for this feature:
BLAST of DR908248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PER67_ARATH4.575e-2230.32Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER5_ARATH5.671e-2232.32Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER1_ARAHY5.673e-2233.67Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER2_ORYSI5.673e-2232.65Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER70_ARATH5.975e-2234.29Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER3_ARMRU1.019e-2130.40Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER28_ARATH1.019e-2133.33Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER24_ARATH1.019e-2132.52Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER20_ARATH1.019e-2128.70Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER13_ARATH1.019e-2131.84Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16376 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908248 ID=DR908248; Name=DR908248; organism=Citrus sinensis; type=EST; length=684bp
TACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGT
TTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGC
TTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAA
AGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGACAGCAT
GTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGAC
TTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAG
CTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCA
TGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGG
CTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAAC
AACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCA
TCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCA
AGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTT
TCTGAGAACACCCTCTCACAGGTACAAAGGGTGAGATCCGAAGGTTTGCA
ATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
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