DR908122

Overview
NameDR908122
Unique NameDR908122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP7 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    6 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWE 476
            I   ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ + YGT+P+V  TGGL DTV         +   TGF     S D                RRA+  +    L + + +N +AQD  W   A  ++
Sbjct:  315 IDELMEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDSNKESIEQRTATGFVFNYPSSD----------DFLEAFRRAVNLWKKNKLWSSVRQNALAQDFGWARAAASYQ 471          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP2 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    6 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWE 476
            I   ++E VQ++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ + YGT+P+V  TGGL DTV         +   TGF     S D                RRA+  +    L + + +N +AQD  W   A  ++
Sbjct:  315 IDELMEERVQLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDSNKESIEQRTATGFVFNYPSSD----------DFLEAFRRAVNLWKKNKLWSSVRQNALAQDFGWARAAASYQ 471          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 68/186 (36.56%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   33 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 569
            QI+VLGTG + +E  L +L I +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AM YG++PIV + GGLVDTV       +  TGF    F       +P+D    +  VR   A    ++  E+ K  M Q  SW+  A ++E   +  EV+G  EP  D  E+   +    A P
Sbjct:  304 QIVVLGTGDQILESALWELAIDHPGRFAVFLTYDDYLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRNVGGLVDTVIPHDPINKSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHRRSWKELQKRAMTQMYSWERSAMEYE--TMYKEVSGYKEPSPDAIEVEKFSVGQDADP 478          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   33 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 476
            Q+ +LG+G   +E+QL  L   +P K      ++  L+H+I AG D  L+PSRFEPCGL Q+++ HYGT P+V +TGGL+DTV         ++  +GF     + D          +    ++RA+  Y  T+    + +NGM +D SW+  A  ++
Sbjct:  339 QLALLGSGDALLEQQLAALAQAFPTKIAVRIGYDEALSHLINAGTDCFLMPSRFEPCGLNQMYSQHYGTPPVVHATGGLMDTVVDLTPETLADKSASGFHFHEMTAD----------SFMEGIKRAINAYHNTRLWKNLQRNGMQKDFSWQASASAYQ 486          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIE (Glycogen synthase OS=Haemophilus influenzae (strain PittEE) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 51/153 (33.33%), Postives = 88/153 (57.52%), Query Frame = 3
Query:   18 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKW 473
            +K+  Q+++LG+G   +E+ + +L   YPE       ++  L+H+++AG D IL+PSRFEPCGL QL+ + YGT+P+V  TGGL DTV +      + + +      +     A+   ++RA A +       M++ + M QD SW+  A+++
Sbjct:  318 VKQGGQLMILGSGAPHLEQGIRELAAQYPENIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-ASESIKARTATGFVFENATPEALRHCLQRAFALWQKPRAWTMVRTDAMEQDFSWRKAAEQY 469          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 56/160 (35.00%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   27 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKWEETLLNL 494
            +++++VLGTG    E++L++    YP K R +  +   LAH I AGAD  L+PSRFEPCG+ Q+ AM YGT+PIV  TGGL DTV      +G   G    D  A +      +   +++A+  +  Q     ++ +N ++ D SW   A ++ +   +L
Sbjct:  310 DIRLVVLGTGDAHYEERLQRFAEGYPGKLRVILGYQEELAHRIYAGADIFLMPSRFEPCGIAQMIAMSYGTIPIVRETGGLKDTVRPYSPISGEGNGFTFTDYNAHE------LLYAIQKAVEMFRNQKDTWQKLQENALSSDFSWNRSAARYRDVYESL 463          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 479
            AI   +  +VQ+++LG G+         +   YPEK      +N  L+H I AG+DF ++PS FEPCGL Q++++ YGT+PIV +TGGL D+V    E+  TG     +S D +A+       V T  RR        A+A ++ N MA+  +W+  A ++EE
Sbjct:  324 AIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADALFDTVGWTVHTWYRR------KDAMAALIGNAMAKRFTWEDSAARYEE 480          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19
Identity = 56/160 (35.00%), Postives = 87/160 (54.37%), Query Frame = 3
Query:   12 HFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 473
            + +  +VQ ++LGTG K  E+  + +E  +P+K      F+I LA  I A +D  L+PSR+EPCGL Q++++ YGT+P+V  TGGL DTV    EE   G   G            D A +   V RA+  +  +     ++++N M  DLSW+  A ++
Sbjct:  322 YILNMDVQFVLLGTGDKKYEEMFKDIEKEFPDKMSANITFDIVLAQKIYASSDMFLMPSRYEPCGLGQMYSLRYGTIPVVRYTGGLADTVMEYDEEAMKGNGFG--------FKEYDSAYLLKAVARAVDFFKNKKGHWKKLIENAMKTDLSWERSANEY 473          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_STRGC (Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19
Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   12 HFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA--LATYGTQALAEMMKNGMAQDLSW 452
            +F++++VQII+LGTG    E+        YP+K      F++ LA  I A +D  L+PSRFEPCGL Q+ AM YGT+P+V   GGL DTVE       +G TGF   +FS             +S T + A  L T+  +A   M +  M +D SW
Sbjct:  317 NFLQQDVQIILLGTGDPAFEQAFAWFGQAYPDKLSANILFDVGLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGQG-TGFSFNNFS----------GYWLSWTFKEALNLYTHDKEAWKSMQEQAMERDFSW 461          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19
Identity = 66/181 (36.46%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   33 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 569
            QI+VLGTG+  +E  L QL   YP +      ++  L+ +I AG D  L+PSRFEPCG+ QL AM YG++P+V + GGLVDTV       Q G+ F  D    +P+D    +  VR   A    ++   +    M Q  SW   A ++E   +  +V G  EP  D EE+   +    A P
Sbjct:  304 QIVVLGTGESALESALWQLATEYPGRFAVFLTYDDYLSRLIYAGTDAFLMPSRFEPCGISQLLAMRYGSIPVVRNVGGLVDTVSPHDPSKQTGTGFCFD--RFEPIDF--YTALVRSWEAYRHRRSWRRLQIRAMTQTYSWDRSAYEYEN--MYKDVCGVKEPSPDAEEVEKFSVGQDADP 478          
The following BLAST results are available for this feature:
BLAST of DR908122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_ACTP71.024e-1935.93Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_ACTP21.024e-1935.93Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_PROMA1.338e-1936.56Glycogen synthase OS=Prochlorococcus marinus GN=gl... [more]
GLGA_NITEC1.338e-1934.18Glycogen synthase OS=Nitrosomonas eutropha (strain... [more]
GLGA_HAEIE1.338e-1933.33Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_DESHD1.338e-1935.00Glycogen synthase OS=Desulfitobacterium hafniense ... [more]
GLGA1_GEOSL1.338e-1936.20Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_THEAB1.747e-1935.00Glycogen synthase OS=Thermosipho africanus (strain... [more]
GLGA_STRGC1.747e-1939.10Glycogen synthase OS=Streptococcus gordonii (strai... [more]
GLGA_PROM41.747e-1936.46Glycogen synthase OS=Prochlorococcus marinus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16250 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908122 ID=DR908122; Name=DR908122; organism=Citrus sinensis; type=EST; length=718bp
CTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGT
ACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTA
CCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATA
TGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCT
TGTGGTCTCATTCAATTACATGCCATGCATTATGGAACCGTACCTATCGT
GGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGAT
TCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGAT
GTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTAC
TCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCAT
GGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTT
GCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAA
GGAAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTAT
TTTGGACCGCAAACATGTTCCTGTAATTCTCCACAACCCAAGATATTACT
TAGGAAATAACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCATAA
TGGTTTGGAGTTGAGACA
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