DR908122

Overview
NameDR908122
Unique NameDR908122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21
Identity = 57/158 (36.08%), Postives = 91/158 (57.59%), Query Frame = 3
Query:    6 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 473
            + + +  ++Q +VLGTG K  E+  + +E  YP+K     KF++ LA  I A +D  L+PSR+EPCGL Q++++ YGTVPIV  TGGL D+V+E    +   +   +       D A +  TV +A+  Y  +     +++KN M  D+SW   AK++
Sbjct:  320 VDYMMMFDIQFVVLGTGDKKYEEFFKNIEKKYPQKISSNMKFDVDLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTVPIVRYTGGLADSVKE----YDPKTRDGNGFGFREYDTAHLLETVAKAVYFYKKEKDHWGKVVKNAMKTDVSWDRSAKQY 473          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 518
            A+P+ +K   Q+ V+GTG +P+E         +P +      ++ PLAH ++AG D +L+PSRFEPCGL Q +A  YGTVP+  +TGGL DT V+ G+     G    +    +  +V A    V RA+  Y  +     ++K   AQD  W   A  + +   +L   G   G
Sbjct:  319 ALPNILKMGAQVAVVGTGDRPLEDGFRAAAAAHPTQVAARIGYSEPLAHRMMAGGDMLLMPSRFEPCGLTQFYAFRYGTVPVAHATGGLADTLVDTGYDTLMTG--KANGFVFEHSNVGAFQWAVERAVGLYAKKDQWTRIVKACNAQDFGWGRSAGLYRDLYKSLTGNGGGKG 490          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_XANC5 (Glycogen synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glgA PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 3
Query:    9 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 473
            P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A  +G +PI  +TGGL+DTV++G TGF     SV+          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  346 PQIVAAGGQIAVIGGGEPEIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 491          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 473
            A P       Q++V+G+G   +E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++ YGTVP+V +TGGL DTV +          +   +  D     A++  + RALA Y   A    +M+ GMAQD SW   A+ +
Sbjct:  318 AEPLLAAGEAQLVVVGSGDATLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAY 474          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 68/183 (37.16%), Postives = 95/183 (51.91%), Query Frame = 3
Query:   27 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 569
            + QI+VLGTG + +E  L QL   +P K      ++  L+ +I  G+D  L+PSRFEPCG+ QL+AM YG+VP+V   GGLVDTV         G+ F  D    +PVD    +  VR   A     +  E+ K GM QD SW   A  ++  L+  +V G  EP  D   +   ++   A P
Sbjct:  302 DTQIVVLGTGDRGLESGLWQLASRHPGKCAVFLTYDDDLSRLIYGGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVDF--YTALVRAWEAFRHRDSWTELQKRGMNQDYSWDRSAVDYD--LMYKDVCGIKEPTPDAALVEQFSQGQAADP 478          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS9 (Glycogen synthase OS=Synechococcus sp. (strain CC9902) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 68/181 (37.57%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   33 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 569
            QI+VLGTG + +E  L QL   YP K      ++  L+ +I AG+D  L+PSRFEPCG+ QL+AM YG+VP+V + GGLVDTV         G+ F  D    +PVD    +  VR   A     +  ++ K GM +D SW   A +++  L+  +V G  EP  D   +   ++   A P
Sbjct:  304 QIVVLGTGDRGLESGLWQLASRYPGKCAVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRNVGGLVDTVPPHDPNADRGTGFCFD--RFEPVDF--YTALVRAWEAYRHRSSWQDLQKRGMTEDYSWDRSAVEYD--LMYKDVCGIKEPTPDAALLEQFSRGQDADP 478          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP5 (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA--LATYGTQA----LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 509
            +P  + E +Q+ +LG G   +E    Q+   +P +   V  ++  LAH+I AGAD +L+PSRFEPCGL QL A+ YG VP+VA  GGL DTV +          ++       V  + V+  +  A  + T+G  +       + +NGM  D+SW+ PA+ + +   NL  A S
Sbjct:  317 LPLLLSEGIQLALLGAGDAALEAAFRQVAQSHPGQIGVVVGYDEDLAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTVVDA------NEMAIAAGVATGVQFSPVTRDMLAAALIKTHGLYSDRTTWQALQQNGMRSDVSWRNPAQHYAQLYRNLLAARS 484          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   12 HFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV--DPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 479
            HF  E + I++LG+G   +E QL QL   Y         +N  LAH+I AG+D+IL+PSR EPCGL Q++AM YGT+PIV  TGGL DTV +         F  D   +  D   V  +  ++ RA+  Y  + +   +++ GMA D SW+   +++ E
Sbjct:  317 HF--EEINILILGSGNAEIESQLTQLRNDYKGNYNVFIGYNEELAHLIYAGSDYILMPSRVEPCGLNQMYAMRYGTIPIVRRTGGLRDTVID---------FGDDGNGICHDQASVGDICYSINRAVKLYDDKISFNTVLRRGMAADHSWERVCQEYIE 464          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 479
            AI   ++ N Q+++LG+   P  +        QL   Y ++AR    ++ PL+H+I AGADFIL+PS FEPCGL QL AM YG++P+V  TGGL DT   V+      Q      +  + D  D   V   + RAL+ +  G      + K  M QD SW  PA  + E
Sbjct: 1053 AIWRTLERNGQVVLLGSAPDPRVQNNFVNLANQLHSKYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLE 1221          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 3
Query:    9 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 473
            P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A  +G +PI  +TGGL+DTV++G TGF     SV+          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  311 PQIVAAGGQIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456          
The following BLAST results are available for this feature:
BLAST of DR908122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_THELT2.438e-2136.08Glycogen synthase OS=Thermotoga lettingae (strain ... [more]
GLGA_MAGSA2.438e-2133.91Glycogen synthase OS=Magnetospirillum magneticum (... [more]
GLGA_XANC53.184e-2136.54Glycogen synthase OS=Xanthomonas campestris pv. ve... [more]
GLGA_THISH3.184e-2137.34Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_SYNSC3.184e-2137.16Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_SYNS93.184e-2137.57Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_RHOP53.184e-2134.48Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_FLAJ13.184e-2138.36Glycogen synthase OS=Flavobacterium johnsoniae (st... [more]
SSY3_SOLTU4.159e-2137.28Soluble starch synthase 3, chloroplastic/amyloplas... [more]
GLGA_XANAC4.159e-2136.54Glycogen synthase OS=Xanthomonas axonopodis pv. ci... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16250 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908122 ID=DR908122; Name=DR908122; organism=Citrus sinensis; type=EST; length=718bp
CTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGT
ACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTA
CCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATA
TGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCT
TGTGGTCTCATTCAATTACATGCCATGCATTATGGAACCGTACCTATCGT
GGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGAT
TCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGAT
GTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTAC
TCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCAT
GGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTT
GCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAA
GGAAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTAT
TTTGGACCGCAAACATGTTCCTGTAATTCTCCACAACCCAAGATATTACT
TAGGAAATAACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCATAA
TGGTTTGGAGTTGAGACA
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