DR908122

Overview
NameDR908122
Unique NameDR908122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_XANOM (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 3
Query:    9 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 473
            P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A  +G +PI  +TGGL+DTV++G TGF     SV+          A+   + RA  T+     LA M +  M +   W     K+
Sbjct:  346 PQIVAAGGQIAVIGGGEPDIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 3
Query:    9 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 473
            P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A  +G +PI  +TGGL+DTV++G TGF     S +          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  311 PQIVAAGGQIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 3
Query:    9 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 473
            P  +    QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A  +G +PI  +TGGL+DTV++G TGF     S +          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  311 PQIVAAGGQIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 60/161 (37.27%), Postives = 93/161 (57.76%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV----EEG--FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA-LATYGTQALAEMMKNGMAQDLSWKGPA 464
            AIP  + E +Q+ +LG+G + ++ + +      P +   V  ++  LAH+I AG+D +++PSRFEPCGL QL A+ YG VPIV+  GGL DT+    E G   TGF+ G          PV   A++ T+R+A  A +      ++ +NG+A D+SW+  A
Sbjct:  316 AIPTILGEGMQLALLGSGDRDLQDRYQAAARANPGRIGVVIGYDEILAHLIQAGSDALIVPSRFEPCGLTQLCALRYGAVPIVSRVGGLEDTIVDIGEAGREATGFKFG----------PVTADALAGTLRKANTAFHDKLTWRQLQRNGLATDVSWRSRA 466          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_VIBPA (Glycogen synthase OS=Vibrio parahaemolyticus GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 3
Query:    3 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-CEAVDPV----DVAAVSTTVRRALATYGTQALAEMMK---NGMAQDLSWKGPAKKW 473
            A+  F+K +VQ++V+GTG   +  QLE++   + +K   V  ++  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV   GGL D+V +         + VD C+A   V       A+  T+ RAL  Y  Q L E+ +   + M +D  W+  A+ +
Sbjct:  322 ALADFLKHDVQVVVVGTGDPVLAAQLEEVAAQFSDKFVFVEAYDNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRGVGGLKDSVND---------YDVDPCDATGFVFYEPTSQALLLTMLRALLLY-AQNLTEVQRVQLHAMQKDFCWRKAAESY 476          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20
Identity = 69/182 (37.91%), Postives = 97/182 (53.30%), Query Frame = 3
Query:   33 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 569
            Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AM YG +PIV   GGLVDTVE      + GS F  D    +P+D     T++ R+   Y  Q +  ++    M+   SW   AK++E  L+  +V G  EP  D  E+   +    A P
Sbjct:  304 QVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPID---FYTSLVRSWEEYRHQKSWKQLQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20
Identity = 53/153 (34.64%), Postives = 91/153 (59.48%), Query Frame = 3
Query:   18 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 473
            +K+  Q+++LG+G   +E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ + YGT+P+V  TGGL DTV +  T   + + +      +     A+   ++RA A +   +A A +  + MAQD SW+  A+++
Sbjct:  318 VKQGGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKACTATGFVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQY 469          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 56/152 (36.84%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   24 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 479
            E+VQ+++LGTG    E+  +  E  +P+K +    +N   +H I AGADF+++PS FEPCG+ QL AM YGT+P+V  TGGL DTV + F  F           ++  D      T+RRA++ Y       + +N M     W+  AK++ E
Sbjct:  320 EDVQVVILGTGDYSYEEMFKYYEWKFPDKLKANIYYNNEESHKIYAGADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTV-QSFNEFSKEGNGFSFTNINAHDFL---YTLRRAISFYYNDDFNIIKENAMNSKNDWEKSAKEYIE 467          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 62/161 (38.51%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   18 IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 479
            ++E+VQ I+LG+G    E+  E +   Y EK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YG +PIV  TGGL DTV+      +   GF   +F+             +  TVRRAL  Y   A+  +++K  M +D SWK  A  +++
Sbjct:  319 MQEDVQCIILGSGDSEYEQFFEWMAYEYSEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALTYGVIPIVRETGGLNDTVKSYHVETKSGNGFTFTNFNAH----------DMLYTVRRALRYYEDPAVWNQLVKQAMTEDHSWKTSALAYKD 469          
BLAST of DR908122 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 3
Query:    6 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMHYGTVPIVASTGGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 479
            +P   K  +Q+++LGTG +   K L++   L  +       F+  LA  I AG+D  L+PSR+EPCGL Q+ A+ YG VP+V  TGGL DT+ +E     +   FS      D     A+   + RA+  Y  +A   +MMK GMA D SW   A K+EE
Sbjct:  319 LPRIAKAKLQLVLLGTGDEKYLKLLQEFAALGTDNVSVNIGFHPELAPQIYAGSDIFLMPSRYEPCGLGQMIALRYGAVPVVRKTGGLADTIFDERDQPKEPNGFS-----FDEYTPEALWEALSRAVEAYSDKAAWKKMMKRGMAGDFSWNTSALKYEE 473          
The following BLAST results are available for this feature:
BLAST of DR908122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_XANOM9.264e-2136.54Glycogen synthase OS=Xanthomonas oryzae pv. oryzae... [more]
GLGA_XANCP9.264e-2135.90Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA_XANC89.264e-2135.90Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA2_BRAJA9.264e-2137.27Glycogen synthase 2 OS=Bradyrhizobium japonicum GN... [more]
GLGA_VIBPA1.210e-2036.97Glycogen synthase OS=Vibrio parahaemolyticus GN=gl... [more]
GLGA_PROMT1.210e-2037.91Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAEIG1.210e-2034.64Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_FINM21.580e-2036.84Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_BACCN1.580e-2038.51Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]
GLGA_GEOSF2.064e-2038.13Glycogen synthase OS=Geobacter sp. (strain FRC-32)... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16250 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908122 ID=DR908122; Name=DR908122; organism=Citrus sinensis; type=EST; length=718bp
CTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGT
ACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTA
CCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATA
TGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCT
TGTGGTCTCATTCAATTACATGCCATGCATTATGGAACCGTACCTATCGT
GGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGAT
TCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGAT
GTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTAC
TCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCAT
GGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTT
GCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAA
GGAAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTAT
TTTGGACCGCAAACATGTTCCTGTAATTCTCCACAACCCAAGATATTACT
TAGGAAATAACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCATAA
TGGTTTGGAGTTGAGACA
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