DR908116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THESM (30S ribosomal protein S8P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps8p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 47/124 (37.90%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N+E+ GK+ V ++P S ++ L +M+ GYI +F+ D R G +V+LLG+VN A+ R V+A+E E + R LP ++G +V++T GV+ H+EAL + +GG+++ Y + Sbjct: 7 LANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLLGKVNKAGAIKPRFSVKAKEYEKWEKRFLPAFEFGILVVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METKA (30S ribosomal protein S8P OS=Methanopyrus kandleri GN=rps8p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L DA+ I N E G ++P S ++ L +M+ GYI F+ D R GK V+L+GR+NDC + R V+ E E + R LP R +G +++TTP+GV+ H EA R +GG++L Y + Sbjct: 7 LADAMATIKNNEMVGNKECVIEPASKLIGRVLKVMQEYGYIGSFEFIDDGRSGKFLVKLVGRINDCGVIKPRHPVKKDEWEYWEQRYLPARDFGLLIVTTPEGVMSHYEAKERGIGGRLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_HALWD (30S ribosomal protein S8P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps8p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 111 GRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 G L +AL + NAE G + E+QP S V+ S L + RGYI F+ D + G+ +VEL G +N+C A+ R A E E + R LP R +G +++TT GV+ H EA +GGQV+ Y + Sbjct: 3 GNDPLANALSGVDNAESVGHLSHEIQPASNVIGSVLEVFYDRGYINGFEFVDDGKAGRFEVELSGGINECGAVKPRYSAGADEFERWEKRYLPARDYGALIVTTSHGVMSHYEARETGIGGQVIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 45/124 (36.29%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+L+G++N A+ R V+ARE E + R LP ++G ++++T GV+ H+EA+ + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N ER GK V ++P S ++ L +M+ GYI +F+ + R G KVEL+G++N C A+ R V+ E + R LP R +G ++++T GV+ HEEA +R +GG++L Y + Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 46/124 (37.10%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N+ER GK V ++P S ++ L +M GYI +F+L D R G +V+L+G++N A+ R V+AR+ E + R LP ++G ++++T GV+ H+EAL + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 129 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 488 DA+ AI NA GK V ++P S + L +M+ GYI F+ D R G+ ++ L G +N C +T R V+ ++E + +R LP + +G +++TT GV+ HE+A + VGG++LGY Sbjct: 9 DAMSAIKNAGDTGKLAVTVEPASRLFGDMLKVMQEYGYITGFEKIDDGRGGQFQIALSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGELLGY 128
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L++AL ++ N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+L+GR+N C A+T R + RE + Y R LP+++ G ++++TP GV+ H+EA R+ GG VLGY + Sbjct: 7 LSNALSSLYNNEMRRNKQAIIMPSSKLIVNVLRVMQKEGYVGEFEYIDDGRWGKILVQLMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L++A+ AI NAE G+ E++P S ++ + L +MK GYIK F+ + HR GK VEL G +NDC A+ R E E Y R LP R +G ++++T GV+ ++A ++ +GG +L Y + Sbjct: 6 LSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_PYRFU (30S ribosomal protein S8P OS=Pyrococcus furiosus GN=rps8p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 45/124 (36.29%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+LLGR+N A+ R V+ E E + R LP ++G ++++T GV+ H+EA+ + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130 The following BLAST results are available for this feature:
BLAST of DR908116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908116 ID=DR908116; Name=DR908116; organism=Citrus sinensis; type=EST; length=719bpback to top |