DR908116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L+DAL I NAE G T + P S ++ S L + RGYI F+ D + G+ +VEL G +N+C + R V A E + R LP R +G +V+TT G++ H EA +GGQV+ Y + Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L+DAL I NAE G T + P S ++ S L + RGYI F+ D + G+ +VEL G +N+C + R V A E + R LP R +G +V+TT G++ H EA +GGQV+ Y + Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 45/124 (36.29%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L DAL I N E + K + + P S ++ L+ M+ YI +F+ D +R G+ KVEL G +N C + R V+ E E + R LP + +G +++TTP+G++ H EA R +GG++L Y + Sbjct: 7 LADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METTH (30S ribosomal protein S8P OS=Methanobacterium thermoautotrophicum GN=rps8p PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N E RG + P S ++ L M+ GYI +F+ D R GK VEL G +N C + R V+ E E + R LP + +G ++++TP+G++ H+EA R +GG++L Y + Sbjct: 7 LANALTNIRNNEIRGNVKCRITPASKLIGRVLRTMQKEGYIGEFEYVDDGRAGKFIVELEGNINHCGVIKPRHAVKKDEFEKFEKRYLPAKNFGIIIVSTPEGIMTHKEAKDRGIGGRLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 129 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 DA+ A+ NA GK L+P S ++ + L IM+ GYI F + D R G+ +V L GR+N C A+T R V E+E + R LP + +G ++++T GVL H +A + +GG++LG+ + Sbjct: 9 DAMSALKNAGDCGKPECILEPSSKLLGAMLRIMQDAGYIGSFDMIDDGRGGQFRVHLSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGELLGFVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METB6 (30S ribosomal protein S8P OS=Methanoregula boonei (strain 6A8) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 43/122 (35.25%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 129 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 D + A+ NA GK+ V ++P S ++ + L IM+ GYI F+ + R G++KV L G++N C A+ R V+ E+E + + LP + +G ++++T GV+ H +A R +GG++LGY + Sbjct: 9 DGMSALKNAGDTGKSEVTIEPASKLLGAMLRIMQDAGYIAGFEFIEDGRGGQLKVHLTGKINKCGAICPRFSVQLDEMEYWEKQYLPGKNFGLMILSTSHGVMSHVQARREGIGGELLGYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THEGJ (30S ribosomal protein S8P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 43/124 (34.68%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N+ER GK V ++P S ++ L +M+ GYI +F+ D R G +V+L+G++N A+ R V+A+ E + R LP ++G ++++T GV+ H+EA + +GG+++ Y + Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAKNYEYWEKRFLPAFEFGILIVSTSQGVMTHKEAREKGIGGRLIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_PYRCJ (30S ribosomal protein S8P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 120 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 +L++AL AI NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND A+ R V+ REI + + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 LLSNALTAIKNAEAMGKRQVVIWPVNKLIYYTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGAIRPRFPVKYREIVEWEQKYLPARQIGILVISTSQGVMSHLEAKEKKIGGVLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 45/124 (36.29%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L DA+ I NAE GK ++P S +++ L +M GYI +F+ D + G KV+LLGR+N C + R ++ E+E + R LP R +G ++++T GV+ H +A R +GG +L Y + Sbjct: 6 LADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_AERPE (30S ribosomal protein S8P OS=Aeropyrum pernix GN=rps8p PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREI---EGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +A+ AI NAE RGK + P S ++++ L I++ GYI F+ D R GK +V+LLGR+ND + R V RE+ + + L +R G ++++TP GV+ H EAL+R +GG V+ Y + Sbjct: 7 LANAMAAIKNAEMRGKGEAIIMPSSKLIANVLRILEKEGYIGGFEYIDDGRWGKFRVKLLGRINDIGVVKPRTPVSYRELAKMPEHLRKYLASRDVGLLILSTPQGVMTHREALKRKIGGIVIAYVY 133 The following BLAST results are available for this feature:
BLAST of DR908116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908116 ID=DR908116; Name=DR908116; organism=Citrus sinensis; type=EST; length=719bpback to top |