DR908116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METMP (30S ribosomal protein S8P OS=Methanococcus maripaludis GN=rps8p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ + E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METM5 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ + E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYVRRYLPSKEIGIIIVSTSKGVMSHKEAARLRIGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METST (30S ribosomal protein S8P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L DAL I N E +G + ++P S ++ L+ M+ YI +F+L D + G VEL+G +N C + R V+ E E Y R LP + +G +++TTP GV+ H EA +GG++L Y + Sbjct: 7 LADALTNIRNNELQGNDSCVIKPASKLIGHVLSTMQKENYIGNFELVDDGKAGIFNVELVGNINKCGVIKPRHAVKNTEFEDYEKRYLPAKNFGILIVTTPQGVMTHHEAKEAGIGGRLLVYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METM7 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ + E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METVO (30S ribosomal protein S8P OS=Methanococcus voltae GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 43/124 (34.68%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N E GK T L+P S ++ L +M+ +GYI +F+ + + G KV L+G++N C A+ R V+ +E E + R LP + +G ++++TP G++ H+EA +GG+++ Y + Sbjct: 7 LANALNHISNCENVGKNTAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVTLIGQINKCGAVKPRFAVKNQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKDSGIGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METMJ (30S ribosomal protein S8P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 42/122 (34.43%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 129 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 DA+ I NA GK V ++P S ++ + L +M+ G+I F+ D R G+ +V+L G +N C A++ R V ++E + + LP + +G ++++T GV+ H EA +GGQ+LGY + Sbjct: 9 DAMSTIKNAGDAGKGEVIVEPASKLLGAMLRVMQENGFISGFEFIDDGRGGQFRVQLSGTINKCGAISPRFPVAMADMEYWESQYLPAKNFGILIVSTSKGVISHAEARNEGIGGQLLGYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METM6 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ LN+M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ + E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARSAGVGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIY (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIN (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133 The following BLAST results are available for this feature:
BLAST of DR908116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908116 ID=DR908116; Name=DR908116; organism=Citrus sinensis; type=EST; length=719bpback to top |